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L2_047_000M1_scaffold_2440

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_2440_1
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(2..586)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82064.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L2_047_000M1_scaffold_2440_2
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(583..1278)
DNA (696bp) protein (232aa)
Response regulator receiver domain protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D072_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA82063.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
response regulator
L2_047_000M1_scaffold_2440_3
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(1340..2596)
DNA (1257bp) protein (419aa)
Glycosyltransferase group 2 family protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVU3_9FIRM
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDA82062.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
glycosyltransferase
L2_047_000M1_scaffold_2440_4
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(2758..3960)
DNA (1203bp) protein (401aa)
HI0933 family protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DD09_9FIRM
HI0933 family protein {ECO:0000313|EMBL:CDA82061.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_2440_5
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(3957..4382)
DNA (426bp) protein (142aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Putative Holliday junction resolvase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D2M9_9FIRM
putative Holliday junction resolvase
L2_047_000M1_scaffold_2440_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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4682..4831
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAS0_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
rpmG; 50S ribosomal protein L33
L2_047_000M1_scaffold_2440_7
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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4850..5059
DNA (210bp) protein (70aa)
Protein translocase subunit SecE n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D067_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
secE; putative preprotein translocase SecE subunit
L2_047_000M1_scaffold_2440_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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5070..5597
DNA (528bp) protein (176aa)
Transcription termination/antitermination protein NusG n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVT8_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
nusG; transcription antitermination protein NusG
L2_047_000M1_scaffold_2440_9
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists


5724..6149
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DD06_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
rplK; 50S ribosomal protein L11
L2_047_000M1_scaffold_2440_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists


6164..6856
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D2M4_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
rplA; 50S ribosomal protein L1
L2_047_000M1_scaffold_2440_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists


7265..7774
DNA (510bp) protein (170aa)
50S ribosomal protein L10 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAR7_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
rplJ; 50S ribosomal protein L10
L2_047_000M1_scaffold_2440_12
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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7850..8221
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DGN8_9FIRM
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
rplL; 50S ribosomal protein L7/L12
L2_047_000M1_scaffold_2440_13
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8397..8894)
DNA (498bp) protein (166aa)
Resolvase N-terminal domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1B2_9FIRM
Resolvase N-terminal domain protein {ECO:0000313|EMBL:CDB27286.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_047_000M1_scaffold_2440_14
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9017..9163)
DNA (147bp) protein (49aa)
Resolvase N-terminal domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H1B2_9FIRM
Resolvase N-terminal domain protein {ECO:0000313|EMBL:CDB27286.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Site-specific recombinases, DNA invertase Pin homologs
Displaying 14 items

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