ggKbase home page

L2_047_000M1_scaffold_567

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_567_1
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

1..558
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9C4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81594.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Glycosyltransferase Family 28-like b-glycosyltransferase
L2_047_000M1_scaffold_567_2
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

752..1438
DNA (687bp) protein (229aa)
spoT; GTP pyrophosphokinase SpoT (EC:2.7.6.5)
GTP pyrophosphokinase SpoT n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYP1_9FIRM
GTP pyrophosphokinase SpoT {ECO:0000313|EMBL:CDA81593.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L2_047_000M1_scaffold_567_3
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

1679..2950
DNA (1272bp) protein (424aa)
Putative uncharacterized protein n=1 Tax=Treponema denticola F0402 RepID=E9S1Q4_TREDN
parallel beta-helix repeat-containing protein
Uncharacterized protein {ECO:0000313|EMBL:EGC78141.1}; TaxID=699187 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema denticola F0402.;"
L2_047_000M1_scaffold_567_4
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(3672..5426)
DNA (1755bp) protein (585aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DA48_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81874.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Na+/phosphate symporter
L2_047_000M1_scaffold_567_5
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

5651..6121
DNA (471bp) protein (157aa)
Putative small multi-drug export protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D221_9FIRM
Putative small multi-drug export protein {ECO:0000313|EMBL:CDA81875.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_567_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

6470..8086
DNA (1617bp) protein (539aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DCD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81876.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_567_7
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

8278..9594
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CZK5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81878.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_567_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9611..10294
DNA (684bp) protein (228aa)
Putative transcriptional regulatory protein WalR n=2 Tax=Oscillibacter RepID=U2Q567_9FIRM
Putative transcriptional regulatory protein WalR {ECO:0000313|EMBL:ERK63649.1}; Flags: Fragment;; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
OmpR family two-component response regulator
L2_047_000M1_scaffold_567_9
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

10459..11901
DNA (1443bp) protein (481aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
putative two-component histidine kinase (EC:2.7.13.3)
Putative two-component histidine kinase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DCE2_9FIRM
L2_047_000M1_scaffold_567_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

11984..12931
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVA0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81882.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_567_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

13008..13874
DNA (867bp) protein (289aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hemK; protein methyltransferase HemK (EC:2.1.1.-)
Release factor glutamine methyltransferase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CZL1_9FIRM
L2_047_000M1_scaffold_567_12
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists


13954..15060
DNA (1107bp) protein (369aa)
Protein RecA n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DA57_9FIRM
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
recA; RecA protein
L2_047_000M1_scaffold_567_13
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

15060..15680
DNA (621bp) protein (207aa)
Regulatory protein RecX n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D230_9FIRM
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
recX; regulatory protein RecX
L2_047_000M1_scaffold_567_14
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

15691..17010
DNA (1320bp) protein (440aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DCE6_9FIRM
hypothetical protein
L2_047_000M1_scaffold_567_15
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

17083..17607
DNA (525bp) protein (175aa)
pgsA; phosphatidylglycerophosphate synthase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVA6_9FIRM
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:CDA81887.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L2_047_000M1_scaffold_567_16
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

17916..19361
DNA (1446bp) protein (482aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DTF8_9FIRM
L2_047_000M1_scaffold_567_17
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

19463..20830
DNA (1368bp) protein (456aa)
Serine proteinase inhibitor n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CXC8_9FIRM
Serine proteinase inhibitor {ECO:0000313|EMBL:CDA81218.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
proteinase inhibitor I4 serpin
L2_047_000M1_scaffold_567_18
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists


21209..21517
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=2 Tax=Firmicutes RepID=R6D868_9FIRM
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
rpsJ; 30S ribosomal protein S10
L2_047_000M1_scaffold_567_19
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21676..22395
DNA (720bp) protein (240aa)
50S ribosomal protein L3 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HMN5_9FIRM
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rplC; 50S ribosomal protein L3
L2_047_000M1_scaffold_567_20
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


22416..23039
DNA (624bp) protein (208aa)
50S ribosomal protein L4 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GNZ2_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rplD; 50S ribosomal protein L4
L2_047_000M1_scaffold_567_21
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23039..23335
DNA (297bp) protein (99aa)
50S ribosomal protein L23 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZN0_9FIRM
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rplW; 50S ribosomal protein L23
L2_047_000M1_scaffold_567_22
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23354..24190
DNA (837bp) protein (279aa)
50S ribosomal protein L2 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GRV8_9FIRM
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rplB; 50S ribosomal protein L2
L2_047_000M1_scaffold_567_23
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists


24206..24469
DNA (264bp) protein (88aa)
30S ribosomal protein S19 n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D6V2_9FIRM
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
rpsS; 30S ribosomal protein S19
L2_047_000M1_scaffold_567_24
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists


24490..24825
DNA (336bp) protein (112aa)
50S ribosomal protein L22 n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D9N9_9FIRM
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
rplV; 50S ribosomal protein L22
L2_047_000M1_scaffold_567_25
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists


24845..25699
DNA (855bp) protein (285aa)
30S ribosomal protein S3 n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CXH7_9FIRM
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
rpsC; 30S ribosomal protein S3
L2_047_000M1_scaffold_567_26
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25699..26133
DNA (435bp) protein (145aa)
50S ribosomal protein L16 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZN5_9FIRM
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rplP; 50S ribosomal protein L16
L2_047_000M1_scaffold_567_27
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26135..26326
DNA (192bp) protein (64aa)
50S ribosomal protein L29 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GRW1_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rpmC; 50S ribosomal protein L29
L2_047_000M1_scaffold_567_28
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists


26328..26591
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D6U7_9FIRM
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
rpsQ; 30S ribosomal protein S17
L2_047_000M1_scaffold_567_29
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26607..26975
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HMP3_9FIRM
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
rplN; 50S ribosomal protein L14
L2_047_000M1_scaffold_567_30
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists


26991..27305
DNA (315bp) protein (105aa)
50S ribosomal protein L24 n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CXH4_9FIRM
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
rplX; 50S ribosomal protein L24
Displaying items 1-30 of 50 in total

View Taxonomy