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L2_047_000M1_scaffold_893

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_893_1
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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2..1906
DNA (1905bp) protein (635aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAS3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82064.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
histidine kinase
L2_047_000M1_scaffold_893_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2556..3011
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C5N9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI79840.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_047_000M1_scaffold_893_3
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(3282..4496)
DNA (1215bp) protein (405aa)
Fucose permease n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYU8_9FIRM
Fucose permease {ECO:0000313|EMBL:CDA81663.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
major facilitator transporter
L2_047_000M1_scaffold_893_4
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(4493..6034)
DNA (1542bp) protein (514aa)
xylB; xylulose kinase (EC:2.7.1.17)
Xylulose kinase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUP7_9FIRM
Xylulose kinase {ECO:0000313|EMBL:CDA81662.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L2_047_000M1_scaffold_893_5
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(6094..7401)
DNA (1308bp) protein (436aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
xylA; Xylose isomerase (EC:5.3.1.5)
Xylose isomerase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBV3_9FIRM
L2_047_000M1_scaffold_893_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(7406..8452)
DNA (1047bp) protein (349aa)
Inner-membrane translocator n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1J4_9FIRM
Inner-membrane translocator {ECO:0000313|EMBL:CDA81660.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
inner-membrane translocator
L2_047_000M1_scaffold_893_7
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(8449..9957)
DNA (1509bp) protein (503aa)
ABC-type sugar transport system, ATPase component (EC:3.6.3.17)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9I0_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA81659.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L2_047_000M1_scaffold_893_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(10060..11136)
DNA (1077bp) protein (359aa)
Periplasmic binding protein and sugar binding domain of the LacI family protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYU3_9FIRM
Periplasmic binding protein and sugar binding domain of the LacI family protein {ECO:0000313|EMBL:CDA81658.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
sugar ABC transporter periplasmic protein
L2_047_000M1_scaffold_893_9
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(11196..12344)
DNA (1149bp) protein (383aa)
Oxidoreductase domain protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUP4_9FIRM
Oxidoreductase domain protein {ECO:0000313|EMBL:CDA81657.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
dehydrogenase
L2_047_000M1_scaffold_893_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(12365..13357)
DNA (993bp) protein (331aa)
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBU8_9FIRM
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:CDA81656.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
sugar phosphate isomerase/epimerase
L2_047_000M1_scaffold_893_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(13419..14414)
DNA (996bp) protein (332aa)
Transcriptional regulator LacI family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1J2_9FIRM
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDA81655.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Transcriptional regulator, LacI family
L2_047_000M1_scaffold_893_12
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(14806..16209)
DNA (1404bp) protein (468aa)
Dihydroorotase multifunctional complex type n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9H5_9FIRM
Dihydroorotase multifunctional complex type {ECO:0000313|EMBL:CDA81654.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
dihydroorotase, multifunctional complex type
L2_047_000M1_scaffold_893_13
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(16459..17337)
DNA (879bp) protein (293aa)
Transcriptional regulator GntR family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYT8_9FIRM
Transcriptional regulator GntR family {ECO:0000313|EMBL:CDA81653.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
GntR family transcriptional regulator
L2_047_000M1_scaffold_893_14
[Eubacterium] sulci, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17423..19120)
DNA (1698bp) protein (566aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S2C3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EUC77768.1}; TaxID=888727 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XIII. Incertae Sedis.;" source="Eubacterium sulci ATCC 35585.;"
roundabout, axon guidance receptor 3
L2_047_000M1_scaffold_893_15
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19748..20224
DNA (477bp) protein (159aa)
Carbon-monoxide dehydrogenase small subunit n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9Z882_9CLOT
Carbon-monoxide dehydrogenase small subunit {ECO:0000313|EMBL:ENZ16232.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein
L2_047_000M1_scaffold_893_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20221..22641
DNA (2421bp) protein (807aa)
xanthine dehydrogenase (EC:1.17.1.4)
Molybdopterin-binding domain of aldehyde dehydrogenase family protein n=1 Tax=Clostridium difficile CD160 RepID=T3D672_CLODI
Molybdopterin-binding domain of aldehyde dehydrogenase family protein {ECO:0000313|EMBL:EQF23374.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
L2_047_000M1_scaffold_893_17
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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22979..23731
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Bacillus sp. L1(2012) RepID=UPI000349BF7E
UbiD family decarboxylase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 17 items

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