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L2_047_000M1_scaffold_963

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_963_1
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(46..651)
DNA (606bp) protein (202aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYK4_9FIRM
L2_047_000M1_scaffold_963_2
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(626..1201)
DNA (576bp) protein (192aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
metK; S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYK4_9FIRM
L2_047_000M1_scaffold_963_3
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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1521..2396
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81537.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_963_4
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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2665..3660
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81536.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Predicted transcriptional regulators
L2_047_000M1_scaffold_963_5
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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3710..4417
DNA (708bp) protein (236aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1C4_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CDA81535.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
ABC-type multidrug transport system, ATPase component
L2_047_000M1_scaffold_963_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

4417..6018
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D983_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81534.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_963_7
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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6170..7990
DNA (1821bp) protein (607aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYK0_9FIRM
L2_047_000M1_scaffold_963_8
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8039..8815
DNA (777bp) protein (259aa)
Predicted permeases n=1 Tax=Eubacterium sp. CAG:38 RepID=R7H9J2_9FIRM
Predicted permeases {ECO:0000313|EMBL:CDE36329.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
Predicted permeases
L2_047_000M1_scaffold_963_9
Dictyostelium fasciculatum, Dictyostelium, Dictyosteliida, Eukaryota

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comp(8851..9966)
DNA (1116bp) protein (372aa)
Putative uncharacterized protein n=1 Tax=Dictyostelium fasciculatum (strain SH3) RepID=F4PVQ5_DICFS
Putative uncharacterized protein {ECO:0000313|EMBL:EGG20069.1}; TaxID=1054147 species="Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium.;" source="Dictyostelium fasciculatum (strain SH3) (Slime mold).;"
hypothetical protein
L2_047_000M1_scaffold_963_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9970..10482)
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CJ71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO27667.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_047_000M1_scaffold_963_11
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(10568..11332)
DNA (765bp) protein (255aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I0G2_9FIRM
L2_047_000M1_scaffold_963_12
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(11349..11990)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DSW6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA80997.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_963_13
unknown

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comp(12181..14682)
DNA (2502bp) protein (834aa)

This feature has no annotations

L2_047_000M1_scaffold_963_14
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(14889..15845)
DNA (957bp) protein (319aa)
Putative germination protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBN7_9FIRM
Putative germination protein {ECO:0000313|EMBL:CDA81576.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
putative germination protein
L2_047_000M1_scaffold_963_15
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(15842..17293)
DNA (1452bp) protein (484aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
putative two-component histidine kinase (EC:2.7.13.3)
Osmosensitive K+ channel histidine kinase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1E4_9FIRM
L2_047_000M1_scaffold_963_16
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(17337..18047)
DNA (711bp) protein (237aa)
OmpR family two-component response regulator n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9B2_9FIRM
OmpR family two-component response regulator {ECO:0000313|EMBL:CDA81574.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
OmpR family two-component response regulator
L2_047_000M1_scaffold_963_17
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(18044..18412)
DNA (369bp) protein (123aa)
Competence protein ComEA helix-hairpin-helix repeat protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYM8_9FIRM
Competence protein ComEA helix-hairpin-helix repeat protein {ECO:0000313|EMBL:CDA81573.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_963_18
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

18521..19888
DNA (1368bp) protein (456aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
D-alanyl-D-alanine carboxypeptidase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUH1_9FIRM
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CDA81572.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L2_047_000M1_scaffold_963_19
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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19890..20543
DNA (654bp) protein (218aa)
Pseudouridine synthase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBN2_9FIRM
Pseudouridine synthase {ECO:0000313|EMBL:CDA81571.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
pseudouridine synthase
L2_047_000M1_scaffold_963_20
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(20624..21265)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D1E3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81570.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Integral membrane protein
L2_047_000M1_scaffold_963_21
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(21268..22119)
DNA (852bp) protein (284aa)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Endonuclease IV (EC:3.1.21.2 3.1.21.-)
Probable endonuclease 4 n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9A8_9FIRM
L2_047_000M1_scaffold_963_22
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(22116..22580)
DNA (465bp) protein (155aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CYM5_9FIRM
hypothetical protein
L2_047_000M1_scaffold_963_23
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

22689..22931
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DUG7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81567.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Displaying 23 items

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