ggKbase home page

L2_047_000M1_scaffold_1543

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1543_1
unknown

Not on your lists

2..97
DNA (96bp) protein (32aa)

This feature has no annotations

L2_047_000M1_scaffold_1543_2
unknown

Not on your lists

comp(94..768)
DNA (675bp) protein (225aa)

This feature has no annotations

L2_047_000M1_scaffold_1543_3
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1010..1375)
DNA (366bp) protein (122aa)
HNH endonuclease n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WXD4_9EURY
HNH endonuclease {ECO:0000313|EMBL:ELY53861.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 18795.;"
HNH endonuclease
L2_047_000M1_scaffold_1543_4
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

1898..3670
DNA (1773bp) protein (591aa)
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D065_9FIRM
DNA primase {ECO:0000313|EMBL:CDA81170.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L2_047_000M1_scaffold_1543_5
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

3667..5004
DNA (1338bp) protein (446aa)
RNA polymerase sigma factor SigA n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D821_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
sigA; RNA polymerase sigma factor SigA
L2_047_000M1_scaffold_1543_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

5013..5819
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CX82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81168.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_1543_7
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

6019..7923
DNA (1905bp) protein (635aa)
Diguanylate cyclase (GGDEF) domain n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DTB7_9FIRM
Diguanylate cyclase (GGDEF) domain {ECO:0000313|EMBL:CDA81167.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
diguanylate cyclase (GGDEF) domain
L2_047_000M1_scaffold_1543_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

7920..8726
DNA (807bp) protein (269aa)
Amino acid ABC transporter substrate-binding protein PAAT family (TC 3.A.1.3.-) n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DAH9_9FIRM
Amino acid ABC transporter substrate-binding protein PAAT family (TC 3.A.1.3.-) {ECO:0000313|EMBL:CDA81166.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L2_047_000M1_scaffold_1543_9
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

8716..10833
DNA (2118bp) protein (706aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D060_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81165.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_1543_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

10830..11186
DNA (357bp) protein (119aa)
FOG: HPt domain n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D816_9FIRM
FOG: HPt domain {ECO:0000313|EMBL:CDA81164.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
FOG: HPt domain
L2_047_000M1_scaffold_1543_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(11553..13040)
DNA (1488bp) protein (496aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DB83_9FIRM
L2_047_000M1_scaffold_1543_12
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(13142..13969)
DNA (828bp) protein (276aa)
Carbohydrate ABC transporter membrane protein 2 CUT1 family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D354_9FIRM
Carbohydrate ABC transporter membrane protein 2 CUT1 family {ECO:0000313|EMBL:CDA82215.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
carbohydrate ABC transporter membrane protein 2, CUT1 family
L2_047_000M1_scaffold_1543_13
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(13939..14886)
DNA (948bp) protein (316aa)
Carbohydrate ABC transporter membrane protein 1 CUT1 family n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DDD2_9FIRM
Carbohydrate ABC transporter membrane protein 1 CUT1 family {ECO:0000313|EMBL:CDA82216.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family
L2_047_000M1_scaffold_1543_14
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(15033..16343)
DNA (1311bp) protein (437aa)
ABC transporter solute-binding protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DW74_9FIRM
ABC transporter solute-binding protein {ECO:0000313|EMBL:CDA82217.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L2_047_000M1_scaffold_1543_15
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(16486..17499)
DNA (1014bp) protein (338aa)
Transcriptional regulators n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D0M2_9FIRM
Transcriptional regulators {ECO:0000313|EMBL:CDA82218.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Transcriptional regulators
L2_047_000M1_scaffold_1543_16
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(17754..18269)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DB86_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82219.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_1543_17
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(18266..18484)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D358_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82220.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Protein of unknown function (DUF1653).
L2_047_000M1_scaffold_1543_18
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

18574..19050
DNA (477bp) protein (159aa)
mutX; mutator MutT protein (EC:3.6.1.-)
Mutator MutT protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DDD7_9FIRM
Mutator MutT protein {ECO:0000313|EMBL:CDA82221.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L2_047_000M1_scaffold_1543_19
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19047..19472
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M618_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66435.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L2_047_000M1_scaffold_1543_20
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

19941..20969
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CXZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81393.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_1543_21
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(21174..22397)
DNA (1224bp) protein (408aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D4X8_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCX75300.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative sugar ABC transporter ATP-binding protein
L2_047_000M1_scaffold_1543_22
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(22690..23049)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DBW4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81676.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L2_047_000M1_scaffold_1543_23
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23046..23936)
DNA (891bp) protein (297aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
murC; UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9L4_9FIRM
Displaying 23 items

View Taxonomy