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L2_047_000M1_scaffold_4548

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_4548_1
unknown

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2..238
DNA (237bp) protein (79aa)

This feature has no annotations

L2_047_000M1_scaffold_4548_2
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(145..672)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HMY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27287.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L2_047_000M1_scaffold_4548_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(669..1805)
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R7N1_CLOSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL03760.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L2_047_000M1_scaffold_4548_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2184..3578)
DNA (1395bp) protein (465aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HGN3_9FIRM
L2_047_000M1_scaffold_4548_5
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3744..4412)
DNA (669bp) protein (223aa)
Hydrogenase accessory protein HypB n=1 Tax=Clostridium sp. ASF502 RepID=N2B447_9CLOT
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EMZ31419.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hydrogenase nickel incorporation protein HypB
L2_047_000M1_scaffold_4548_6
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(4414..4653)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DB78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA82209.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Zn finger protein HypA/HybF (possibly regulating hydrogenase expression)
L2_047_000M1_scaffold_4548_7
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(4704..7511)
DNA (2808bp) protein (936aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D0L5_9FIRM
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:CDA82208.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
NADPH-dependent glutamate synthase beta chain and related oxidoreductases
L2_047_000M1_scaffold_4548_8
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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7710..8408
DNA (699bp) protein (233aa)
Regulatory protein GntR HTH n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HN55_9FIRM
Regulatory protein GntR HTH {ECO:0000313|EMBL:CDB27342.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
regulatory protein GntR HTH
L2_047_000M1_scaffold_4548_9
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8499..9560)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M693_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS66211.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
infB; translation initiation factor IF-2
L2_047_000M1_scaffold_4548_10
unknown

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9584..9736
DNA (153bp) protein (51aa)

This feature has no annotations

L2_047_000M1_scaffold_4548_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(9915..10310)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6CXS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81338.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
Displaying 11 items

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