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L2_047_000M1_scaffold_2147

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_2147_1
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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2..1069
DNA (1068bp) protein (356aa)
Putative stage V sporulation protein B n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISN6_9FIRM
Putative stage V sporulation protein B {ECO:0000313|EMBL:CCY39852.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
putative transporter
L2_047_000M1_scaffold_2147_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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1098..1868
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY39851.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_047_000M1_scaffold_2147_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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1906..2181
DNA (276bp) protein (92aa)
Histone family protein DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICN2_9FIRM
Histone family protein DNA-binding protein {ECO:0000313|EMBL:CCY39850.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
histone family protein DNA-binding protein
L2_047_000M1_scaffold_2147_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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2360..2656
DNA (297bp) protein (99aa)
30S ribosomal protein S6 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IHR9_9FIRM
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rpsF; 30S ribosomal protein S6
L2_047_000M1_scaffold_2147_5
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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2669..3151
DNA (483bp) protein (161aa)
Single-stranded DNA-binding protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICL5_9FIRM
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ssb; single-stranded DNA-binding protein
L2_047_000M1_scaffold_2147_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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3188..3427
DNA (240bp) protein (80aa)
30S ribosomal protein S18 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISN1_9FIRM
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
SSU ribosomal protein S18P
L2_047_000M1_scaffold_2147_7
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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3487..3969
DNA (483bp) protein (161aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISY5_9FIRM
hypothetical protein
L2_047_000M1_scaffold_2147_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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3985..4335
DNA (351bp) protein (117aa)
Rhamnogalacturonan acetylesterase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IHR4_9FIRM
Rhamnogalacturonan acetylesterase {ECO:0000313|EMBL:CCY39844.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
mannose-6-phosphate isomerase
L2_047_000M1_scaffold_2147_9
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(4460..4903)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY39843.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_047_000M1_scaffold_2147_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(4900..6186)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISM4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY39842.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_047_000M1_scaffold_2147_11
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(6435..7727)
DNA (1293bp) protein (431aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
M18 family aminopeptidase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISY0_9FIRM
peptidase M18
L2_047_000M1_scaffold_2147_12
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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7868..9091
DNA (1224bp) protein (408aa)
Peptidase M29 aminopeptidase II n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ICM3_9FIRM
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:CCY39840.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
peptidase M29 aminopeptidase II
L2_047_000M1_scaffold_2147_13
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

9618..10220
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IHQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY39839.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Bacterial extracellular solute-binding proteins, family 5 Middle.
Displaying 13 items

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