ggKbase home page

L2_047_000M1_scaffold_3382

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_3382_1
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

173..418
DNA (246bp) protein (82aa)
Transcriptional regulator AbrB family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J3N3_9FIRM
Transcriptional regulator AbrB family {ECO:0000313|EMBL:CCY43641.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
transcriptional regulator, AbrB family
L2_047_000M1_scaffold_3382_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(488..1390)
DNA (903bp) protein (301aa)
Hydrolase alpha/beta domain protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITH1_9FIRM
Hydrolase alpha/beta domain protein {ECO:0000313|EMBL:CCY43639.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
putative hydrolase
L2_047_000M1_scaffold_3382_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

1477..1677
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J3M9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43636.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_3382_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(1664..2848)
DNA (1185bp) protein (395aa)
Diaminopimelate decarboxylase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITG6_9FIRM
Diaminopimelate decarboxylase {ECO:0000313|EMBL:CCY43634.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
diaminopimelate decarboxylase
L2_047_000M1_scaffold_3382_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2855..3628)
DNA (774bp) protein (258aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
pantothenate kinase (EC:2.7.1.33)
Type III pantothenate kinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDB1_9FIRM
L2_047_000M1_scaffold_3382_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(3634..4119)
DNA (486bp) protein (162aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Phosphoesterase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5INH3_9FIRM
MJ0936 family phosphodiesterase
L2_047_000M1_scaffold_3382_7
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

4203..4418
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43624.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_3382_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

4411..4800
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IN90_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43623.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_3382_9
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

4797..5099
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J3Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43622.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_3382_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(5383..6120)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J0E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY42447.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_3382_11
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(6189..7064)
DNA (876bp) protein (292aa)
mnaA; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J0B2_9FIRM
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:CCY42446.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_3382_12
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(7224..8282)
DNA (1059bp) protein (353aa)
UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosamine-1-phosphate transferase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IQB2_9FIRM
UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosamine-1-phosphate transferase {ECO:0000313|EMBL:CCY42444.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosamine-1-phosphate transferase
L2_047_000M1_scaffold_3382_13
unknown

Not on your lists

8334..8483
DNA (150bp) protein (50aa)

This feature has no annotations

L2_047_000M1_scaffold_3382_14
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(8453..9445)
DNA (993bp) protein (331aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140, ECO:0000256|SAAS:SAAS00009965};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IUN0_9FIRM
L2_047_000M1_scaffold_3382_15
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

9577..11067
DNA (1491bp) protein (497aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IUH4_9FIRM
Displaying 15 items

View Taxonomy