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L2_047_000M1_scaffold_1014

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1014_1
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(3..629)
DNA (627bp) protein (209aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LGH4_9FIRM
Serine--tRNA ligase {ECO:0000313|EMBL:CDB86588.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L2_047_000M1_scaffold_1014_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(648..1205)
DNA (558bp) protein (186aa)
SH3 type 3 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IXC7_9FIRM
SH3 type 3 {ECO:0000313|EMBL:CCY41427.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_1014_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(1205..2080)
DNA (876bp) protein (292aa)
Chromosome partitioning protein ParB n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IM94_9FIRM
Chromosome partitioning protein ParB {ECO:0000313|EMBL:CCY41429.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
parB; chromosome partitioning protein ParB
L2_047_000M1_scaffold_1014_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(2095..2880)
DNA (786bp) protein (262aa)
CobQ/CobB/MinD/ParA nucleotide binding domain protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IXD2_9FIRM
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:CCY41432.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
parA; chromosome partitioning protein ParA
L2_047_000M1_scaffold_1014_5
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(3255..3833)
DNA (579bp) protein (193aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
SOS-response transcriptional repressor, LexA (EC:3.4.21.88)
LexA repressor n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IMA2_9FIRM
L2_047_000M1_scaffold_1014_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(3908..4792)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IXD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41437.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
radical SAM domain protein
L2_047_000M1_scaffold_1014_7
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

4898..5464
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IH19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY41438.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_1014_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

5494..6852
DNA (1359bp) protein (453aa)
putative RNA methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IH91_9FIRM
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:CCY41440.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_1014_9
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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7029..7355
DNA (327bp) protein (109aa)
Predicted transcriptional regulator n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IXE1_9FIRM
Predicted transcriptional regulator {ECO:0000313|EMBL:CCY41442.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
transcriptional regulator
L2_047_000M1_scaffold_1014_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(7925..8455)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITN0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40162.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_047_000M1_scaffold_1014_11
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(8517..10013)
DNA (1497bp) protein (499aa)
ABC transporter related protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IDI4_9FIRM
ABC transporter related protein {ECO:0000313|EMBL:CCY40163.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ABC transporter ATP-binding protein
L2_047_000M1_scaffold_1014_12
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

10616..11215
DNA (600bp) protein (200aa)
Helix-turn-helix domain protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IIN2_9FIRM
Helix-turn-helix domain protein {ECO:0000313|EMBL:CCY40164.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
helix-turn-helix domain-containing protein
L2_047_000M1_scaffold_1014_13
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(11437..11892)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IDM0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40165.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_047_000M1_scaffold_1014_14
unknown

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comp(11910..12305)
DNA (396bp) protein (132aa)

This feature has no annotations

L2_047_000M1_scaffold_1014_15
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(12295..12657)
DNA (363bp) protein (121aa)
Transcriptional regulator PadR-like family n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITW5_9FIRM
Transcriptional regulator PadR-like family {ECO:0000313|EMBL:CCY40166.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
yizB; DNA/RNA binding protein
L2_047_000M1_scaffold_1014_16
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

12853..13779
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40167.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_1014_17
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

13808..14272
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IDI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40168.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_1014_18
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

14291..14710
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IIN5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40169.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_1014_19
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

14833..16983
DNA (2151bp) protein (717aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ATP-dependent DNA helicase UvrD/REP family protein (EC:3.6.1.-)
UvrD/REP helicase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IDM3_9FIRM
L2_047_000M1_scaffold_1014_20
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(17013..17288)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITW9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40171.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_047_000M1_scaffold_1014_21
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(17327..18274)
DNA (948bp) protein (316aa)
Gamma-D-glutamyl-(L)-meso-diaminopimelate peptidase I metallo peptidase MEROPS family M14C n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITP1_9FIRM
Gamma-D-glutamyl-(L)-meso-diaminopimelate peptidase I metallo peptidase MEROPS family M14C {ECO:0000313|EMBL:CCY40172.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase I
L2_047_000M1_scaffold_1014_22
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(18307..20307)
DNA (2001bp) protein (667aa)
putative aminopeptidase (EC:3.4.11.-)
Dephospho-CoA kinase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IDJ1_9FIRM
Dephospho-CoA kinase {ECO:0000313|EMBL:CCY40173.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_1014_23
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(20304..21188)
DNA (885bp) protein (295aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synthase {ECO:0000256|PIRNR:PIRNR004930}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IIP0_9FIRM
Displaying 23 items

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