ggKbase home page

L2_047_000M1_scaffold_1552

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1552_1
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(2..106)
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IFH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40860.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_1552_2
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(124..1131)
DNA (1008bp) protein (336aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IFF2_9FIRM
hypothetical protein
L2_047_000M1_scaffold_1552_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(1149..1898)
DNA (750bp) protein (250aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rRNA methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IVP4_9FIRM
L2_047_000M1_scaffold_1552_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(1916..2410)
DNA (495bp) protein (165aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rRNA methyltransferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IVP4_9FIRM
L2_047_000M1_scaffold_1552_5
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(2420..3340)
DNA (921bp) protein (307aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043681}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IVV1_9FIRM
L2_047_000M1_scaffold_1552_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(3337..3840)
DNA (504bp) protein (168aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IFH2_9FIRM
L2_047_000M1_scaffold_1552_7
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(4058..5425)
DNA (1368bp) protein (456aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IKK9_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCY40854.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
putative efflux protein, MATE family
L2_047_000M1_scaffold_1552_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(5661..7631)
DNA (1971bp) protein (657aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IFE8_9FIRM
ATP-dependent metalloprotease FtsH
L2_047_000M1_scaffold_1552_9
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

7825..8628
DNA (804bp) protein (268aa)
rRNA methyltransferase (EC:2.1.1.-)
RNA methyltransferase TrmH family group 3 n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6ML72_9FIRM
RNA methyltransferase TrmH family group 3 {ECO:0000313|EMBL:CDB86567.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
L2_047_000M1_scaffold_1552_10
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

8813..10894
DNA (2082bp) protein (694aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IVU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40846.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_1552_11
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

11059..13128
DNA (2070bp) protein (690aa)
Translation elongation factor G n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IFG0_9FIRM
Translation elongation factor G {ECO:0000313|EMBL:CCY40845.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
fusA; putative elongation factor G
L2_047_000M1_scaffold_1552_12
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

13152..14105
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5IKJ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY40844.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
hypothetical protein
L2_047_000M1_scaffold_1552_13
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

comp(14382..15857)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LH92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86863.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
ATPase family associated with various cellular activities (AAA).
Displaying 13 items

View Taxonomy