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L2_047_000M1_scaffold_4669

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_4669_1
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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1..681
DNA (681bp) protein (227aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5INK8_9FIRM
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:CCY43670.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
cell envelope-related function transcriptional attenuator common domain protein
L2_047_000M1_scaffold_4669_2
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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687..1052
DNA (366bp) protein (122aa)
Ribosomal silencing factor RsfS n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6M0U4_9FIRM
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L2_047_000M1_scaffold_4669_3
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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1350..2444
DNA (1095bp) protein (365aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J431_9FIRM
leucyl tRNA synthetase suspected. See adjacent gene [L2_047_000M1_scaffold_4669_4].
L2_047_000M1_scaffold_4669_4
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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2441..3748
DNA (1308bp) protein (436aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
leucyl-tRNA synthetase, eubacterial and mitochondrial family (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5J431_9FIRM
L2_047_000M1_scaffold_4669_5
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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3887..4069
DNA (183bp) protein (61aa)
30S ribosomal protein S21 n=2 Tax=environmental samples RepID=R5IND4_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
rpsU; 30S ribosomal protein S21
L2_047_000M1_scaffold_4669_6
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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4234..4776
DNA (543bp) protein (181aa)
Sigma-70 region 2 n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ITL7_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:CCY43674.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
RNA polymerase sigma factor
L2_047_000M1_scaffold_4669_7
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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4769..5617
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5INL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43675.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
L2_047_000M1_scaffold_4669_8
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

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comp(5680..7956)
DNA (2277bp) protein (759aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
addA; ATP-dependent nuclease subunit A (EC:3.6.1.-)
ATP-dependent helicase/nuclease subunit A n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5INE0_9FIRM
Displaying 8 items

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