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L2_047_000M1_scaffold_2574

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_2574_1
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(216..428)
DNA (213bp) protein (71aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HQI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE96310.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
phage repressor
L2_047_000M1_scaffold_2574_2
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(700..915)
DNA (216bp) protein (72aa)
Putative Xre family DNA-binding protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KPC4_9FIRM
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:CDE78215.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein predicted by Glimmer/Critica
L2_047_000M1_scaffold_2574_3
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1128..1451
DNA (324bp) protein (108aa)
DNA-binding helix-turn-helix protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LDA3_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EET61337.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
hypothetical protein predicted by Glimmer/Critica
L2_047_000M1_scaffold_2574_4
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1453..1884)
DNA (432bp) protein (144aa)
Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone SACSIN n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7A3U7_9FIRM
Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone SACSIN {ECO:0000313|EMBL:CDD52960.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN
L2_047_000M1_scaffold_2574_5
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1877..2188)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LFG2_RUMC1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL18357.1}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L2_047_000M1_scaffold_2574_6
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2210..2815)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5UXN3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ83048.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
L2_047_000M1_scaffold_2574_7
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3030..3749
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
RNA methyltransferase, RsmE family (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MT47_9FIRM
L2_047_000M1_scaffold_2574_8
unknown

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3863..4156
DNA (294bp) protein (98aa)

This feature has no annotations

L2_047_000M1_scaffold_2574_9
unknown

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comp(4433..4651)
DNA (219bp) protein (73aa)

This feature has no annotations

L2_047_000M1_scaffold_2574_10
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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comp(4665..4871)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EIX9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX92393.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
transcriptional regulator
L2_047_000M1_scaffold_2574_11
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5779..6495)
DNA (717bp) protein (239aa)
Predicted glutamine amidotransferase n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5VR73_9FIRM
Predicted glutamine amidotransferase {ECO:0000313|EMBL:CCZ83042.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
Predicted glutamine amidotransferase
L2_047_000M1_scaffold_2574_12
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6499..7851)
DNA (1353bp) protein (451aa)
UDP-N-acetylmuramyl tripeptide synthase n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5UXN1_9FIRM
UDP-N-acetylmuramyl tripeptide synthase {ECO:0000313|EMBL:CCZ83043.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
UDP-N-acetylmuramyl tripeptide synthase
L2_047_000M1_scaffold_2574_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8633..9034)
DNA (402bp) protein (134aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6Z6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC65499.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
Displaying 13 items

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