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L2_047_000M1_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 249 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_22_1
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

Not on your lists

comp(41..910)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6F2G7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB03186.1}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:145.;"
hypothetical protein
L2_047_000M1_scaffold_22_2
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(903..1049)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Clostridium leptum DSM 753 RepID=A7VX85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO60382.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
L2_047_000M1_scaffold_22_3
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1039..1374)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:352 RepID=R6QUJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC36669.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
hypothetical protein
L2_047_000M1_scaffold_22_4
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1379..2455)
DNA (1077bp) protein (359aa)
Site-specific recombinase phage integrase family n=1 Tax=Eubacterium sp. CAG:202 RepID=R6NWZ3_9FIRM
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDC02257.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Site-specific recombinase XerD
L2_047_000M1_scaffold_22_5
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2455..2646)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MRE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02258.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Sugar-specific transcriptional regulator TrmB.
L2_047_000M1_scaffold_22_6
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2830..3459
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N1U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC02259.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L2_047_000M1_scaffold_22_7
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3681..5216)
DNA (1536bp) protein (512aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MQU7_9FIRM
GMP synthase
L2_047_000M1_scaffold_22_8
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5285..5728)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Blautia hydrogenotrophica CAG:147 RepID=R5C0I0_9FIRM
GNAT family acetyltransferase {ECO:0000313|EMBL:KEF28397.1}; TaxID=1454376 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum IPLA36007.;"
Predicted P-loop ATPase fused to an acetyltransferase
L2_047_000M1_scaffold_22_9
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5763..6464)
DNA (702bp) protein (234aa)
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MSM7_9FIRM
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 {ECO:0000313|EMBL:CDF02837.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
L2_047_000M1_scaffold_22_10
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6457..7494)
DNA (1038bp) protein (346aa)
Iron-only hydrogenase maturation rSAM protein HydE n=1 Tax=Blautia sp. CAG:237 RepID=R6L562_9FIRM
Iron-only hydrogenase maturation rSAM protein HydE {ECO:0000313|EMBL:CDB77321.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
radical SAM domain-containing protein
L2_047_000M1_scaffold_22_11
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7521..8723)
DNA (1203bp) protein (401aa)
Bacterial cell division membrane protein n=2 Tax=Ruminococcus RepID=D4LCJ9_RUMC1
Bacterial cell division membrane protein
Bacterial cell division membrane protein {ECO:0000313|EMBL:CDD54069.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
L2_047_000M1_scaffold_22_12
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8739..10283)
DNA (1545bp) protein (515aa)
Mg chelatase-related protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MSN2_9FIRM
Mg chelatase-related protein {ECO:0000313|EMBL:CDF02842.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
Mg chelatase-related protein
L2_047_000M1_scaffold_22_13
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10520..14254)
DNA (3735bp) protein (1245aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7AF16_9FIRM
L2_047_000M1_scaffold_22_14
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14309..18085)
DNA (3777bp) protein (1259aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MJW0_9FIRM
L2_047_000M1_scaffold_22_15
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18368..19207)
DNA (840bp) protein (280aa)
Nucleotide-binding protein n=3 Tax=root RepID=B0MK04_9FIRM
Nucleotide-binding protein {ECO:0000313|EMBL:CDC47955.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
ATPases involved in chromosome partitioning
L2_047_000M1_scaffold_22_16
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19261..20799)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MJS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF00875.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
cls; cardiolipin synthase
L2_047_000M1_scaffold_22_17
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20896..22173)
DNA (1278bp) protein (426aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375, ECO:0000256|SAAS:SAAS00088818};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QN90_9CLOT
L2_047_000M1_scaffold_22_18
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22152..23120)
DNA (969bp) protein (323aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
porphobilinogen synthase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QQK5_9CLOT
L2_047_000M1_scaffold_22_19
Clostridium sp. CAG:964, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23089..24597)
DNA (1509bp) protein (503aa)
hemD; Uroporphyrinogen-III C-methyltransferase/Uroporphyrinogen-III synthase (EC:2.1.1.107)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:964 RepID=R6UJG1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC80366.1}; TaxID=1262848 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:964.;"
L2_047_000M1_scaffold_22_20
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24594..25478)
DNA (885bp) protein (295aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Clostridium sp. CAG:352 RepID=R6QYN0_9CLOT
L2_047_000M1_scaffold_22_21
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25511..25972)
DNA (462bp) protein (154aa)
GNAT family acetyltransferase (EC:2.3.1.-)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CGS5_9CLOT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDA75893.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L2_047_000M1_scaffold_22_22
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26011..26658)
DNA (648bp) protein (216aa)
siroheme synthase, N-terminal domain (EC:1.3.1.76 4.99.1.4)
Siroheme synthase N-terminal domain n=1 Tax=Clostridium sp. CAG:352 RepID=R6QQJ7_9CLOT
Siroheme synthase N-terminal domain {ECO:0000313|EMBL:CDC38045.1}; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
L2_047_000M1_scaffold_22_23
Clostridium sp. CAG:352, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26645..27739)
DNA (1095bp) protein (365aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; TaxID=1262798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:352.;"
glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase n=1 Tax=Clostridium sp. CAG:352 RepID=R6RUB2_9CLOT
L2_047_000M1_scaffold_22_24
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27958..28413
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KUU1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE80130.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
Putative transcriptional regulator (rrf2 family)
L2_047_000M1_scaffold_22_25
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

Not on your lists

28725..30977
DNA (2253bp) protein (751aa)
formate acetyltransferase 1 (EC:2.3.1.54)
Formate acetyltransferase n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MEG1_9FIRM
Formate acetyltransferase {ECO:0000313|EMBL:CDB96975.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
L2_047_000M1_scaffold_22_26
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31056..31808
DNA (753bp) protein (251aa)
Pyruvate formate-lyase-activating enzyme {ECO:0000256|RuleBase:RU362053}; EC=1.97.1.4 {ECO:0000256|RuleBase:RU362053};; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
act2; pyruvate formate-lyase-activating enzyme (EC:1.97.1.4)
Pyruvate formate-lyase 1-activating enzyme n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GKK8_9FIRM
L2_047_000M1_scaffold_22_27
Eubacterium sp. CAG:38, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31963..32778
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:38 RepID=R7HAZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE36486.1}; TaxID=1262889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:38.;"
hypothetical protein
L2_047_000M1_scaffold_22_28
Clostridium sp. CAG:127, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32778..34016
DNA (1239bp) protein (413aa)
Putative ATP synthase F0 A subunit n=1 Tax=Clostridium sp. CAG:127 RepID=R5PHY4_9CLOT
Putative ATP synthase F0 A subunit {ECO:0000313|EMBL:CCZ09511.1}; TaxID=1262774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:127.;"
hypothetical protein
L2_047_000M1_scaffold_22_29
unknown

Not on your lists

34139..34447
DNA (309bp) protein (103aa)

This feature has no annotations

L2_047_000M1_scaffold_22_30
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34457..35791
DNA (1335bp) protein (445aa)
serine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBL16309.1}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAMAP-Rule:MF_00051, ECO:0000313|EMBL:CBL16309.1};; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
Serine hydroxymethyltransferase n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4L9L4_RUMC1
Displaying items 1-30 of 249 in total

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