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L2_047_000M1_scaffold_251

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_251_1
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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512..994
DNA (483bp) protein (161aa)
Putative flavoprotein n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GVT2_SELRL
putative flavoprotein
Putative flavoprotein {ECO:0000313|EMBL:BAL84869.1}; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
L2_047_000M1_scaffold_251_2
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1032..1697
DNA (666bp) protein (222aa)
Pyrimidine reductase, riboflavin biosynthesis n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M0W2_CLOCD
pyrimidine reductase, riboflavin biosynthesis
Pyrimidine reductase, riboflavin biosynthesis {ECO:0000313|EMBL:AEV70205.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45).;"
L2_047_000M1_scaffold_251_3
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1786..2118)
DNA (333bp) protein (111aa)
HTH-type transcriptional activator HxlR n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7KSC4_9FIRM
HTH-type transcriptional activator HxlR {ECO:0000313|EMBL:CDE77847.1}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
hypothetical protein
L2_047_000M1_scaffold_251_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2383..3012
DNA (630bp) protein (210aa)
dihydrodipicolinate reductase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37515
Uncharacterized protein {ECO:0000313|EMBL:KGF56209.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative NADH-flavin reductase
L2_047_000M1_scaffold_251_5
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3081..3701
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UCV6_RUMA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU22785.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L2_047_000M1_scaffold_251_6
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3706..4470
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37D28
Appr-1-p processing protein
Appr-1-p processing domain protein {ECO:0000313|EMBL:ADU22786.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L2_047_000M1_scaffold_251_7
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4421..5290
DNA (870bp) protein (290aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37C0D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU22787.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L2_047_000M1_scaffold_251_8
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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5412..6287
DNA (876bp) protein (292aa)
Phage protein Gp37/Gp68 n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6N0A4_9FIRM
Phage protein Gp37/Gp68 {ECO:0000313|EMBL:CDB99781.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
hypothetical protein
L2_047_000M1_scaffold_251_9
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7041..8972)
DNA (1932bp) protein (644aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C622_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG72556.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L2_047_000M1_scaffold_251_10
unknown

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9061..9279
DNA (219bp) protein (73aa)

This feature has no annotations

L2_047_000M1_scaffold_251_11
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9268..10863)
DNA (1596bp) protein (532aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:0000256|HAMAP-Rule:MF_00069}; Prismane protein {ECO:0000256|HAMAP-Rule:MF_00069}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hydroxylamine reductase (EC:1.7.-.-)
Hydroxylamine reductase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2K530_9FIRM
L2_047_000M1_scaffold_251_12
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10876..11574)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZIY8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ16957.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L2_047_000M1_scaffold_251_13
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11672..12328
DNA (657bp) protein (219aa)
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H8D9_9FIRM
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases {ECO:0000313|EMBL:CDE34467.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
cAMP-binding proteins-catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
L2_047_000M1_scaffold_251_14
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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12425..13558
DNA (1134bp) protein (378aa)
Transcriptional regulator, LysR family n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LDN6_9FIRM
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EET61090.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
transcriptional regulator
L2_047_000M1_scaffold_251_15
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13657..14457)
DNA (801bp) protein (267aa)
Flavodoxin n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CEB5_9FIRM
Flavodoxin {ECO:0000313|EMBL:CDA71274.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
hypothetical protein
L2_047_000M1_scaffold_251_16
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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comp(14625..15512)
DNA (888bp) protein (296aa)
Aldo/keto reductase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GWN8_9FIRM
Aldo/keto reductase {ECO:0000313|EMBL:CDB29903.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Aldo/keto reductases, related to diketogulonate reductase
L2_047_000M1_scaffold_251_17
Pseudomonas sp. GM60, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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16044..16379
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. GM60 RepID=J2TSL4_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJM77444.1}; TaxID=1144334 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM60.;"
L2_047_000M1_scaffold_251_18
unknown

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16396..17124
DNA (729bp) protein (243aa)

This feature has no annotations

L2_047_000M1_scaffold_251_19
unknown

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17117..17299
DNA (183bp) protein (61aa)

This feature has no annotations

L2_047_000M1_scaffold_251_20
unknown

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17299..17565
DNA (267bp) protein (89aa)

This feature has no annotations

L2_047_000M1_scaffold_251_21
unknown

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17638..18702
DNA (1065bp) protein (355aa)

This feature has no annotations

L2_047_000M1_scaffold_251_22
unknown

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18724..19614
DNA (891bp) protein (297aa)

This feature has no annotations

L2_047_000M1_scaffold_251_23
unknown

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19617..20093
DNA (477bp) protein (159aa)

This feature has no annotations

L2_047_000M1_scaffold_251_24
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20452..23469)
DNA (3018bp) protein (1006aa)
ABC transporter permease/ATP-binding protein (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7F7P2_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDE11284.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
L2_047_000M1_scaffold_251_25
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23644..24315
DNA (672bp) protein (224aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SSW8_CLOC7
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADL52630.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L2_047_000M1_scaffold_251_26
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24312..25367
DNA (1056bp) protein (352aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SSW7_CLOC7
integral membrane sensor signal transduction histidine kinase
L2_047_000M1_scaffold_251_27
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25577..26194
DNA (618bp) protein (206aa)
Transcriptional regulator TetR family n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6D8D7_9FIRM
transcriptional regulator, TetR family
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDA74112.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
L2_047_000M1_scaffold_251_28
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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26390..28165
DNA (1776bp) protein (592aa)
ABC transporter permease/ATP-binding protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KYN6_OSCVS
ABC transporter permease/ATP-binding protein
ABC transporter permease/ATP-binding protein {ECO:0000313|EMBL:BAK98680.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_047_000M1_scaffold_251_29
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28158..29894
DNA (1737bp) protein (579aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DUR1_CLOS4
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERJ00646.1}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
ABC transporter, permease/ATP-binding protein
L2_047_000M1_scaffold_251_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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30023..30298
DNA (276bp) protein (92aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Clostridium RepID=D6DFY6_CLOSC
Metal-sensitive transcriptional repressor family protein {ECO:0000313|EMBL:EQI15216.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
hypothetical protein
Displaying items 1-30 of 80 in total

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