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L2_047_000M1_scaffold_598

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_598_1
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..120)
DNA (120bp) protein (40aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W0F4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ38061.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
DNA methylase
L2_047_000M1_scaffold_598_2
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

645..3260
DNA (2616bp) protein (872aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CA73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA73473.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
hypothetical protein
L2_047_000M1_scaffold_598_3
unknown

Not on your lists

3382..4332
DNA (951bp) protein (317aa)

This feature has no annotations

L2_047_000M1_scaffold_598_4
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4604..5173)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MLH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF00788.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
ANTAR domain-containing protein
L2_047_000M1_scaffold_598_5
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5189..6478)
DNA (1290bp) protein (430aa)
L-glutamine synthetase (EC:6.3.1.2)
Glutamine synthetase type I n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MI81_9FIRM
Glutamine synthetase type I {ECO:0000313|EMBL:CDF00789.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
L2_047_000M1_scaffold_598_6
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6944..8689
DNA (1746bp) protein (582aa)
Adenylate/guanylate cyclase n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5V454_9FIRM
Adenylate/guanylate cyclase {ECO:0000313|EMBL:CCZ82899.1}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
ammonium transporter
L2_047_000M1_scaffold_598_7
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8863..11190
DNA (2328bp) protein (776aa)
Endoglucanase {ECO:0000256|RuleBase:RU361166}; EC=3.2.1.4 {ECO:0000256|RuleBase:RU361166};; Flags: Fragment;; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Endoglucanase 1 domain protein (Fragment) n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2JTK6_9FIRM
Bacterial surface proteins containing Ig-like domains
L2_047_000M1_scaffold_598_8
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11506..12693
DNA (1188bp) protein (396aa)
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
S-adenosylmethionine synthase n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LCU3_RUMC1
L2_047_000M1_scaffold_598_9
Ruminococcus sp. CAG:330, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12763..13848
DNA (1086bp) protein (362aa)
Lysophospholipase L1-like esterase n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FB84_9FIRM
Lysophospholipase L1-like esterase {ECO:0000313|EMBL:CDE11911.1}; TaxID=1262954 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:330.;"
G-D-S-L family lipolytic protein
L2_047_000M1_scaffold_598_10
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13879..14205)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YW00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA28774.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
phosphoesterase
L2_047_000M1_scaffold_598_11
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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comp(14303..16876)
DNA (2574bp) protein (858aa)
Cation-transporting ATPase (EC:3.6.3.-)
Calcium-transporting ATPase P-type HADfamily subfamily IC n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R6H8_9FIRM
Calcium-transporting ATPase P-type HADfamily subfamily IC {ECO:0000313|EMBL:CDC43500.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
L2_047_000M1_scaffold_598_12
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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17138..18310
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UJH3_RUMA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU23819.1}; Flags: Precursor;; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L2_047_000M1_scaffold_598_13
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18437..18748
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=1 Tax=Ruminococcus flavefaciens RepID=UPI0002FD40C5
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
LSU ribosomal protein L21P
L2_047_000M1_scaffold_598_14
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18752..19069
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MRF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF02407.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
hypothetical protein
L2_047_000M1_scaffold_598_15
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


19073..19354
DNA (282bp) protein (94aa)
50S ribosomal protein L27 n=2 Tax=Ruminococcus RepID=D4LDD0_RUMC1
LSU ribosomal protein L27P
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
L2_047_000M1_scaffold_598_16
Ruminococcus champanellensis, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19443..20720
DNA (1278bp) protein (426aa)
GTPase Obg n=1 Tax=Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13) RepID=D4LDD1_RUMC1
Obg family GTPase CgtA
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=213810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus champanellensis (strain DSM 18848 / JCM 17042 / 18P13).;"
L2_047_000M1_scaffold_598_17
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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20727..21134
DNA (408bp) protein (136aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01468};; Mini-RNase III {ECO:0000256|HAMAP-Rule:MF_01468}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
Mini-ribonuclease 3 n=2 Tax=Ruminococcus RepID=D4LDD2_RUMC1
hypothetical protein
L2_047_000M1_scaffold_598_18
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21162..21890
DNA (729bp) protein (243aa)
Probable transcriptional regulatory protein BN739_00989 n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MM24_9FIRM
Probable transcriptional regulatory protein BN739_00989 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
conserved hypothetical protein TIGR01033
L2_047_000M1_scaffold_598_19
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22002..22490)
DNA (489bp) protein (163aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
7-cyano-7-deazaguanine reductase (EC:1.7.1.13)
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Roseburia sp. CAG:197 RepID=R5Y8Z9_9FIRM
L2_047_000M1_scaffold_598_20
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22495..23175)
DNA (681bp) protein (227aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
7-cyano-7-deazaguanine synthase n=1 Tax=Clostridium sp. CAG:122 RepID=R5RQ35_9CLOT
preQ(0) biosynthesis protein QueC
L2_047_000M1_scaffold_598_21
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23187..23765)
DNA (579bp) protein (193aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Clostridium sp. CAG:590 RepID=R5E9A6_9CLOT
L2_047_000M1_scaffold_598_22
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23769..24476)
DNA (708bp) protein (236aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L3W6_9FIRM
Organic radical activating enzymes
L2_047_000M1_scaffold_598_23
Blautia sp. KLE 1732, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24436..24858)
DNA (423bp) protein (141aa)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Ruminococcus sp. CAG:17 RepID=R5N9S6_9FIRM
Queuosine biosynthesis protein QueD {ECO:0000313|EMBL:ERI96082.1}; TaxID=1226324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia sp. KLE 1732.;"
6-pyruvoyl tetrahydrobiopterin synthase
L2_047_000M1_scaffold_598_24
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25007..26167)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MJ63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF00406.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
hypothetical protein
L2_047_000M1_scaffold_598_25
Ruminococcus sp. CAG:353, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26179..27426)
DNA (1248bp) protein (416aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00186003};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1262955 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:353.;"
glutamate-5-semialdehyde dehydrogenase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase n=1 Tax=Ruminococcus sp. CAG:353 RepID=R7L1S5_9FIRM
L2_047_000M1_scaffold_598_26
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27443..28231)
DNA (789bp) protein (263aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
Glutamate 5-kinase n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MQE3_9FIRM
glutamate 5-kinase
L2_047_000M1_scaffold_598_27
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28252..29199)
DNA (948bp) protein (316aa)
Lactate dehydrogenase and related dehydrogenases (EC:1.1.1.29)
glycerate dehydrogenase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C36DF4
Glycerate dehydrogenase {ECO:0000313|EMBL:EWM52640.1}; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
L2_047_000M1_scaffold_598_28
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29204..29509)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7AZX5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD52582.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
hypothetical protein
L2_047_000M1_scaffold_598_29
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

29678..31075
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Bacteroides oleiciplenus YIT 12058 RepID=K9E422_9BACE
Chitin binding protein {ECO:0000313|EMBL:AKB27733.1}; TaxID=1434120 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae T4/M.;"
hypothetical protein
L2_047_000M1_scaffold_598_30
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31182..31652
DNA (471bp) protein (157aa)
Transcription elongation factor GreA n=2 Tax=Ruminococcus RepID=D4LD01_RUMC1
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
Displaying items 1-30 of 33 in total

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