ggKbase home page

L2_047_000M1_scaffold_1288

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_000M1_scaffold_1288_1
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(140..658)
DNA (519bp) protein (173aa)
GCN5-related N-acetyltransferase n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GWD2_9FIRM
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCY20099.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
N-acetyltransferase GCN5
L2_047_000M1_scaffold_1288_2
Clostridium sp. CAG:452, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(815..1225)
DNA (411bp) protein (137aa)
GCN5-related N-acetyltransferase n=1 Tax=Clostridium sp. CAG:452 RepID=R6XU11_9CLOT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CDD27218.1}; TaxID=1262810 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:452.;"
acetyltransferase
L2_047_000M1_scaffold_1288_3
[Eubacterium] cellulosolvens, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1354..1854)
DNA (501bp) protein (167aa)
Acetyltransferase, ribosomal protein N-acetylase n=1 Tax=Eubacterium cellulosolvens 6 RepID=I5AWV7_EUBCE
Acetyltransferase, ribosomal protein N-acetylase {ECO:0000313|EMBL:EIM58280.1}; TaxID=633697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="[Eubacterium] cellulosolvens 6.;"
hypothetical protein
L2_047_000M1_scaffold_1288_4
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2025..2222)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9LBT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS53202.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L2_047_000M1_scaffold_1288_5
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(2327..3160)
DNA (834bp) protein (278aa)
Methionine sulfoxide reductase A n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GUG3_9FIRM
Methionine sulfoxide reductase A {ECO:0000313|EMBL:CDB29073.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
endonuclease
L2_047_000M1_scaffold_1288_6
unknown

Not on your lists

3377..3904
DNA (528bp) protein (176aa)

This feature has no annotations

L2_047_000M1_scaffold_1288_7
unknown

Not on your lists

comp(3931..4692)
DNA (762bp) protein (254aa)

This feature has no annotations

L2_047_000M1_scaffold_1288_8
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4707..6860)
DNA (2154bp) protein (718aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
ribonuclease R (EC:3.1.-.-)
Ribonuclease R n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H2Q1_9FIRM
L2_047_000M1_scaffold_1288_9
Ruminococcus sp. CAG:624, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6980..7243)
DNA (264bp) protein (88aa)
Protein translocase SecG subunit n=1 Tax=Ruminococcus sp. CAG:624 RepID=R7MN47_9FIRM
Protein translocase SecG subunit {ECO:0000313|EMBL:CDF02070.1}; TaxID=1262965 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:624.;"
protein translocase, SecG subunit
L2_047_000M1_scaffold_1288_10
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7442..8125)
DNA (684bp) protein (228aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) RepID=SFSA_CLOB8
sugar fermentation stimulation protein A
Sugar fermentation stimulation protein homolog {ECO:0000255|HAMAP-Rule:MF_00095}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) (Clostridium; acetobutylicum).;"
L2_047_000M1_scaffold_1288_11
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8115..8597)
DNA (483bp) protein (161aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=2 Tax=root RepID=A5Z8I8_9FIRM
prolyl-tRNA synthetase
L2_047_000M1_scaffold_1288_12
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8747..9745
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Clostridium sp. BL8 RepID=T0N263_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQB88974.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
L2_047_000M1_scaffold_1288_13
Clostridium sp. CAG:43, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9966..10517)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:43 RepID=R7A1F1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD54598.1}; TaxID=1262805 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:43.;"
hypothetical protein
L2_047_000M1_scaffold_1288_14
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10946..11482
DNA (537bp) protein (179aa)
Sigma-70 region 2 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SUG5_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:CDC64888.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ECF family RNA polymerase sigma-24 subunit
L2_047_000M1_scaffold_1288_15
unknown

Not on your lists

11479..12159
DNA (681bp) protein (227aa)

This feature has no annotations

L2_047_000M1_scaffold_1288_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12251..12679
DNA (429bp) protein (143aa)
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04939.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_047_000M1_scaffold_1288_17
unknown

Not on your lists

13354..14169
DNA (816bp) protein (272aa)

This feature has no annotations

L2_047_000M1_scaffold_1288_18
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14341..15909
DNA (1569bp) protein (523aa)
Kelch repeat type 1-containing protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9STD2_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM70043.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_047_000M1_scaffold_1288_19
unknown

Not on your lists

15937..16659
DNA (723bp) protein (241aa)

This feature has no annotations

L2_047_000M1_scaffold_1288_20
unknown

Not on your lists

16774..17511
DNA (738bp) protein (246aa)
Dockerin type 1 n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SS49_CLOC7
Dockerin type 1
Displaying 20 items

View Taxonomy