ggKbase home page

L2_047_000M1_scaffold_779_2

Organism: dasL2_047_000M1_metabat_metabat_73_fa_fa

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 15 / 38
Location: comp(1473..2252)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.0
  • Coverage: 256.0
  • Bit_score: 279
  • Evalue 3.90e-72
pseudouridine synthase family (EC:5.4.99.12) similarity KEGG
DB: KEGG
  • Identity: 48.4
  • Coverage: 258.0
  • Bit_score: 243
  • Evalue 6.30e-62
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI00030CF494 similarity UNIREF
DB: UNIREF100
  • Identity: 52.0
  • Coverage: 256.0
  • Bit_score: 279
  • Evalue 2.80e-72

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus flavefaciens → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 780
ATGAATGTAAGACTGGATAAATTTTTGTCCTCTCAGACCGATCTTACCAGAACTGATATAAAAAAACTTCTATGGAAACGTAAAATCAGCGTGAACGGAAAAATACTTCGTGACGGCAGTATAAAGATTGACCCCGAAACATCGGAAATCATCGCTGACGGACGCAAAATCTTATACAGGGATAAAGTATATATAATTTTAAATAAGCCTGAGGGCTTTGTCTGTGCCACTGAGGACAAACATGAAAAAACCGTTATGGATCTTCTGGGTGATGATATAAAAAGAAAAGATATATTTCCCGCCGGCAGACTGGATAAGGATACTATAGGAATGGTTCTTATTACTAATGACGGAACTCTGAGTCACCGAATATTATCTCCCAAAAAACATATTCCTAAATATTATATTGTAAAACTTGCCGAAAGTTTTCAAGAAGATTATGTAAGACAGTTTGCTGAAGGCGTTATAATAGACGGAGGGGAGAAGTGTCTTCCGGCAAAAGTGAAGCGGTTTCCCGACTGCGAAAAAACGGCGTTTATAGAACTTCACGAGGGGAAATATCATCAGATAAAACGTATGTTTTCAGCTGTTGAAAACAGTGTTGAAAAATTGTGCAGAATTCAGATGGGAGGACTGCTGATGCCAGAAAAACTGGCGATTGGCGAGTATATGGAAATAATGCACAAAGATGTTGAAAACCTGTTGAAATCACAATGTTTTGAAGAAGTTTTCCGCAATATTACAGAGAATTTTTCGTCATATTGGATAAACATGCAATGA
PROTEIN sequence
Length: 260
MNVRLDKFLSSQTDLTRTDIKKLLWKRKISVNGKILRDGSIKIDPETSEIIADGRKILYRDKVYIILNKPEGFVCATEDKHEKTVMDLLGDDIKRKDIFPAGRLDKDTIGMVLITNDGTLSHRILSPKKHIPKYYIVKLAESFQEDYVRQFAEGVIIDGGEKCLPAKVKRFPDCEKTAFIELHEGKYHQIKRMFSAVENSVEKLCRIQMGGLLMPEKLAIGEYMEIMHKDVENLLKSQCFEEVFRNITENFSSYWINMQ*