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L2_047_064G1_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 342 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_064G1_scaffold_3_1
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..340
DNA (339bp) protein (113aa)
Sigma-70, region 4 (Fragment) n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CT41_BIFBR
Sigma-70, region 4 {ECO:0000313|EMBL:ERI87685.1}; Flags: Fragment;; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
hypothetical protein
L2_047_064G1_scaffold_3_2
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

690..857
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=S3AFU1_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75129.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
hypothetical protein
L2_047_064G1_scaffold_3_3
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

857..1033
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZEF4_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75128.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_047_064G1_scaffold_3_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1699..2286
DNA (588bp) protein (196aa)
Antioxidant, AhpC/TSA family n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CB37_BIFBR
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:ERI87689.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Thioredoxin peroxidase
L2_047_064G1_scaffold_3_5
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2351..3175)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CT54_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87690.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Hypothetical protein
L2_047_064G1_scaffold_3_6
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3312..3656
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E5L4_BIFBR
Transposase
Uncharacterized protein {ECO:0000313|EMBL:ERI87691.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_047_064G1_scaffold_3_7
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3755..4690)
DNA (936bp) protein (312aa)
peptidase, S9A/B/C family, catalytic domain protein (EC:3.4.-.-)
Uncharacterized protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E0W5_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:ERI87692.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_047_064G1_scaffold_3_8
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4765..5274)
DNA (510bp) protein (170aa)
Macro domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CUH1_BIFBR
Macro domain protein {ECO:0000313|EMBL:ERI87693.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
ATPase associated with chromosome architecture/replication
L2_047_064G1_scaffold_3_9
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5295..6038)
DNA (744bp) protein (248aa)
Ser/Thr phosphatase family protein n=2 Tax=Bifidobacterium breve RepID=F6C9L1_BIFBA
Hypothetical protein
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:ERI87694.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_047_064G1_scaffold_3_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6337..7071
DNA (735bp) protein (245aa)
Transcriptional activator tenA n=5 Tax=Bifidobacterium breve RepID=F9XZR6_BIFBU
Transcriptional activator tenA
TENA/THI-4 family protein {ECO:0000313|EMBL:ERI87695.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_047_064G1_scaffold_3_11
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7080..7301
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C9K9_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ21132.1}; TaxID=1385941 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve NCFB 2258.;"
L2_047_064G1_scaffold_3_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7809..8519)
DNA (711bp) protein (237aa)
phospholipase/carboxylesterase (EC:3.1.-.-)
Phospholipase/carboxylesterase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2E0W9_BIFBR
Phospholipase/carboxylesterase {ECO:0000313|EMBL:ERI87697.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_047_064G1_scaffold_3_13
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8598..9668
DNA (1071bp) protein (357aa)
Methyltransferase domain protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CUH3_BIFBR
Methyltransferase domain protein {ECO:0000313|EMBL:ERI87698.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
tRNA (adenine-N(1)-)-methyltransferase
L2_047_064G1_scaffold_3_14
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9757..10314
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=Q8G650_BIFLO
Phosphohistidine phosphatase sixA
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:ERI87699.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_047_064G1_scaffold_3_15
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10237..10410)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZYH6_BIFBR
Uncharacterized protein {ECO:0000313|EMBL:EPD75107.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_047_064G1_scaffold_3_16
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10563..12866
DNA (2304bp) protein (768aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CT63_BIFBR
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
L2_047_064G1_scaffold_3_17
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13012..13866
DNA (855bp) protein (285aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
Methylenetetrahydrofolate reductase n=5 Tax=Bifidobacterium breve RepID=F6C9K3_BIFBA
Methylenetetrahydrofolate reductase
L2_047_064G1_scaffold_3_18
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14001..14954
DNA (954bp) protein (318aa)
Linear amide C-N hydrolase, choloylglycine hydrolase family protein n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CUH6_BIFBR
Linear amide C-N hydrolase, choloylglycine hydrolase family protein {ECO:0000313|EMBL:ERI87703.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Choloylglycine hydrolase
L2_047_064G1_scaffold_3_19
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15011..18193
DNA (3183bp) protein (1061aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Bifidobacterium breve JCP7499 RepID=U2CB53_BIFBR
Glutamate-ammonia-ligase adenylyltransferase
L2_047_064G1_scaffold_3_20
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18486..19466
DNA (981bp) protein (327aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Aspartate carbamoyltransferase n=3 Tax=Bifidobacterium breve RepID=F9Y080_BIFBU
Aspartate carbamoyltransferase
L2_047_064G1_scaffold_3_21
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19466..19885
DNA (420bp) protein (140aa)
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein {ECO:0000313|EMBL:AEF26924.1}; EC=2.1.3.2 {ECO:0000313|EMBL:AEF26924.1};; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Aspartate carbamoyltransferase regulatory chain, allosteric domain protein n=6 Tax=Bifidobacterium breve RepID=F6C9J9_BIFBA
Aspartate carbamoyltransferase
L2_047_064G1_scaffold_3_22
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19882..21396
DNA (1515bp) protein (505aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Dihydroorotase n=2 Tax=Bifidobacterium breve PF2_BIFBR">RepID=D4BPF2_BIFBR
Dihydroorotase
L2_047_064G1_scaffold_3_23
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21414..22367
DNA (954bp) protein (318aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=866777 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve (strain ACS-071-V-Sch8b).;"
Orotidine 5'-phosphate decarboxylase n=2 Tax=Bifidobacterium breve RepID=F6C9J7_BIFBA
Orotidine 5'-phosphate decarboxylase
L2_047_064G1_scaffold_3_24
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22502..23344
DNA (843bp) protein (281aa)
Oxidoreductase NAD-binding domain protein n=2 Tax=Bifidobacterium breve RepID=F6C9J6_BIFBA
Oxidoreductase NAD-binding domain protein {ECO:0000313|EMBL:ERI86144.1}; Flags: Fragment;; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Dihydroorotate dehydrogenase electron transfer subunit
L2_047_064G1_scaffold_3_25
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23347..24318
DNA (972bp) protein (324aa)
dihydroorotate dehydrogenase 1B (EC:1.3.98.1)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
Dihydroorotate dehydrogenase n=2 Tax=Bifidobacterium breve RepID=F6C9J5_BIFBA
L2_047_064G1_scaffold_3_26
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24322..25017
DNA (696bp) protein (232aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
Orotate phosphoribosyltransferase n=6 Tax=Bifidobacterium breve RepID=F6C9J4_BIFBA
Orotate phosphoribosyltransferase
L2_047_064G1_scaffold_3_27
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25124..25312
DNA (189bp) protein (63aa)
Uncharacterized protein n=4 Tax=Bifidobacterium breve RepID=F6C9J3_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE89544.1}; TaxID=518634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve DSM 20213 = JCM 1192.;"
L2_047_064G1_scaffold_3_28
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25638..26759
DNA (1122bp) protein (374aa)
Uncharacterized protein n=2 Tax=Bifidobacterium breve RepID=F6C9J2_BIFBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERI86148.1}; TaxID=1261072 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCP7499.;"
L2_047_064G1_scaffold_3_29
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26914..27837)
DNA (924bp) protein (308aa)
Transcriptional regulator, LysR family n=6 Tax=Bifidobacterium breve RepID=F6C9J1_BIFBA
LysR family transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:EPD75093.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
L2_047_064G1_scaffold_3_30
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27878..28507)
DNA (630bp) protein (210aa)
HAD hydrolase, family IA, variant 3 n=6 Tax=Bifidobacterium breve RepID=F6C9J0_BIFBA
Haloacid dehalogenase-like hydrolase (HAD superfamily)
HAD hydrolase, family IA {ECO:0000313|EMBL:EPD75092.1}; TaxID=1203540 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve HPH0326.;"
Displaying items 1-30 of 342 in total

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