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L2_047_064G1_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_064G1_scaffold_68_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..945)
DNA (945bp) protein (315aa)
UPI0003D698D9 related cluster n=1 Tax=unknown RepID=UPI0003D698D9
Uncharacterized protein {ECO:0000313|EMBL:ETI83749.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_047_064G1_scaffold_68_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1182..2651
DNA (1470bp) protein (490aa)
UPI0003D675D5 related cluster n=1 Tax=unknown RepID=UPI0003D675D5
Uncharacterized protein {ECO:0000313|EMBL:ETI83750.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_047_064G1_scaffold_68_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2641..3474)
DNA (834bp) protein (278aa)
UPI0003D5DAFA related cluster n=1 Tax=unknown RepID=UPI0003D5DAFA
Uncharacterized protein {ECO:0000313|EMBL:ETI83751.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
HAD family hydrolase
L2_047_064G1_scaffold_68_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3839..4069
DNA (231bp) protein (77aa)
UPI0003D59DD7 related cluster n=1 Tax=unknown RepID=UPI0003D59DD7
Uncharacterized protein {ECO:0000313|EMBL:ETI83752.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_047_064G1_scaffold_68_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4547..5674)
DNA (1128bp) protein (376aa)
Alcohol dehydrogenase zinc-binding domain-containing protein (EC:1.1.1.284 1.1.1.1)
UPI0003D5EB8C related cluster n=1 Tax=unknown RepID=UPI0003D5EB8C
Uncharacterized protein {ECO:0000313|EMBL:ETI83753.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_047_064G1_scaffold_68_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6086..6841
DNA (756bp) protein (252aa)
UPI0003D59855 related cluster n=1 Tax=unknown RepID=UPI0003D59855
Uncharacterized protein {ECO:0000313|EMBL:ETI83754.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
sulfite exporter TauE/SafE
L2_047_064G1_scaffold_68_7
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7114..8763)
DNA (1650bp) protein (550aa)
UPI0003D5D64F related cluster n=1 Tax=unknown RepID=UPI0003D5D64F
Uncharacterized protein {ECO:0000313|EMBL:ETI83755.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
sugar transporter
L2_047_064G1_scaffold_68_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8794..9993)
DNA (1200bp) protein (400aa)
iol; myo-inositol 2-dehydrogenase (EC:1.1.1.18)
UPI0003D6111D related cluster n=1 Tax=unknown RepID=UPI0003D6111D
Uncharacterized protein {ECO:0000313|EMBL:ETI83756.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_047_064G1_scaffold_68_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10296..10580)
DNA (285bp) protein (95aa)
30S ribosomal protein S17 n=1 Tax=Varibaculum cambriense RepID=UPI0003B7A9FC
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rpsQ; 30S ribosomal protein S17
L2_047_064G1_scaffold_68_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10586..10816)
DNA (231bp) protein (77aa)
50S ribosomal protein L29 n=1 Tax=Varibaculum cambriense RepID=UPI0003B3E3C3
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rpmC; 50S ribosomal protein L29
L2_047_064G1_scaffold_68_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(10816..11235)
DNA (420bp) protein (140aa)
UPI0003D62141 related cluster n=1 Tax=unknown RepID=UPI0003D62141
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rplP; 50S ribosomal protein L16
L2_047_064G1_scaffold_68_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(11237..12133)
DNA (897bp) protein (299aa)
30S ribosomal protein S3 n=1 Tax=Varibaculum cambriense RepID=UPI0003B6E374
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
30S ribosomal protein S3P
L2_047_064G1_scaffold_68_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12133..12501)
DNA (369bp) protein (123aa)
50S ribosomal protein L22 n=1 Tax=Varibaculum cambriense RepID=UPI0003B6F007
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
50S ribosomal protein L22
L2_047_064G1_scaffold_68_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12529..12810)
DNA (282bp) protein (94aa)
UPI0003D69449 related cluster n=1 Tax=unknown RepID=UPI0003D69449
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rpsS; 30S ribosomal protein S19
L2_047_064G1_scaffold_68_15
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12825..13661)
DNA (837bp) protein (279aa)
UPI0003D61641 related cluster n=1 Tax=unknown RepID=UPI0003D61641
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rplB; 50S ribosomal protein L2
L2_047_064G1_scaffold_68_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13676..13981)
DNA (306bp) protein (102aa)
UPI0003D5A859 related cluster n=1 Tax=unknown RepID=UPI0003D5A859
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
50S ribosomal protein L23P
L2_047_064G1_scaffold_68_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13986..14630)
DNA (645bp) protein (215aa)
UPI0003D667E7 related cluster n=1 Tax=unknown RepID=UPI0003D667E7
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rplD; 50S ribosomal protein L4
L2_047_064G1_scaffold_68_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(14633..15301)
DNA (669bp) protein (223aa)
UPI0003D61E68 related cluster n=1 Tax=unknown RepID=UPI0003D61E68
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rplC; 50S ribosomal protein L3
L2_047_064G1_scaffold_68_19
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15313..15621)
DNA (309bp) protein (103aa)
30S ribosomal protein S10 n=1 Tax=Varibaculum cambriense RepID=UPI0003B3FA04
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
30S ribosomal protein S10
L2_047_064G1_scaffold_68_20
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16417..16683)
DNA (267bp) protein (89aa)
UPI0003D5F5D0 related cluster n=1 Tax=unknown RepID=UPI0003D5F5D0
Toxin-antitoxin system, toxin component, RelE family {ECO:0000313|EMBL:ETI83770.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
plasmid stabilization system protein
L2_047_064G1_scaffold_68_21
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16680..16901)
DNA (222bp) protein (74aa)
UPI0003D5A861 related cluster n=1 Tax=unknown RepID=UPI0003D5A861
Toxin-antitoxin system, antitoxin component, ribbon-helix-helix fold family protein {ECO:0000313|EMBL:ETI83771.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_047_064G1_scaffold_68_22
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17278..18012)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B2F970
Uncharacterized protein {ECO:0000313|EMBL:EJZ88017.1}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;"
hypothetical protein
L2_047_064G1_scaffold_68_23
Arcanobacterium sp. S3PF19, Arcanobacterium, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18009..19010)
DNA (1002bp) protein (334aa)
Sortase n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YWH6_9ACTO
Fimbrial protein {ECO:0000313|EMBL:KGF06444.1}; TaxID=1219585 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Arcanobacterium.;" source="Arcanobacterium sp. S3PF19.;"
srtA; fimbrial associated sortase family protein
L2_047_064G1_scaffold_68_24
Arcanobacterium sp. S3PF19, Arcanobacterium, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19069..20544)
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0ZJQ0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGF06445.1}; TaxID=1219585 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Arcanobacterium.;" source="Arcanobacterium sp. S3PF19.;"
type-2 fimbrial major subunit precursor
L2_047_064G1_scaffold_68_25
Arcanobacterium sp. S3PF19, Arcanobacterium, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20748..27515)
DNA (6768bp) protein (2256aa)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0Z772_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGF06446.1}; TaxID=1219585 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Arcanobacterium.;" source="Arcanobacterium sp. S3PF19.;"
putative surface-anchored membrane protein
L2_047_064G1_scaffold_68_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27796..28986)
DNA (1191bp) protein (397aa)
UPI0003D638F4 related cluster n=1 Tax=unknown RepID=UPI0003D638F4
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
elongation factor Tu
L2_047_064G1_scaffold_68_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29115..31268)
DNA (2154bp) protein (718aa)
UPI0003D5D7FD related cluster n=1 Tax=unknown RepID=UPI0003D5D7FD
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
fusA; elongation factor EF2
L2_047_064G1_scaffold_68_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(31290..31760)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Varibaculum cambriense RepID=UPI0003B74332
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
30S ribosomal protein S7
L2_047_064G1_scaffold_68_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(31762..32136)
DNA (375bp) protein (125aa)
30S ribosomal protein S12 n=1 Tax=Varibaculum cambriense RepID=UPI0003B5810D
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
30S ribosomal protein S12
L2_047_064G1_scaffold_68_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32534..33916
DNA (1383bp) protein (461aa)
UPI0003D6911E related cluster n=1 Tax=unknown RepID=UPI0003D6911E
Isochorismate synthase {ECO:0000313|EMBL:ETI83776.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
isochorismate synthase
Displaying items 1-30 of 82 in total

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