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L2_047_064G1_scaffold_191

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_064G1_scaffold_191_1
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

336..1811
DNA (1476bp) protein (492aa)
UPI0003D5B8F5 related cluster n=1 Tax=unknown RepID=UPI0003D5B8F5
Uncharacterized protein {ECO:0000313|EMBL:ETI83688.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ErfK/YbiS/YcfS/YnhG family protein
L2_047_064G1_scaffold_191_2
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1808..3937)
DNA (2130bp) protein (710aa)
UPI0003D5EDD6 related cluster n=1 Tax=unknown RepID=UPI0003D5EDD6
Uncharacterized protein {ECO:0000313|EMBL:ETI83689.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
proline iminopeptidase
L2_047_064G1_scaffold_191_3
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4121..5728)
DNA (1608bp) protein (536aa)
purH; Bifunctional purine biosynthesis protein PurH (EC:2.1.2.3)
UPI0003D62896 related cluster n=1 Tax=unknown RepID=UPI0003D62896
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_047_064G1_scaffold_191_4
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5863..8208)
DNA (2346bp) protein (782aa)
UPI0003D66A6E related cluster n=1 Tax=unknown RepID=UPI0003D66A6E
Uncharacterized protein {ECO:0000313|EMBL:ETI83691.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_047_064G1_scaffold_191_5
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8398..9330)
DNA (933bp) protein (311aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
UPI0003D5DE06 related cluster n=1 Tax=unknown RepID=UPI0003D5DE06
L2_047_064G1_scaffold_191_6
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9361..10527)
DNA (1167bp) protein (389aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
UPI0003D60C0E related cluster n=1 Tax=unknown RepID=UPI0003D60C0E
L2_047_064G1_scaffold_191_7
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10837..13923
DNA (3087bp) protein (1029aa)
monovalent cation/H+ antiporter subunit A (EC:1.6.99.5)
cation:proton antiporter n=1 Tax=Varibaculum cambriense RepID=UPI0003B553A3
Uncharacterized protein {ECO:0000313|EMBL:EPD31180.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
L2_047_064G1_scaffold_191_8
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13920..14348
DNA (429bp) protein (143aa)
UPI0003D64E9A related cluster n=1 Tax=unknown RepID=UPI0003D64E9A
Uncharacterized protein {ECO:0000313|EMBL:ETI83696.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
multisubunit Na+/H+ antiporter, MnhC subunit
L2_047_064G1_scaffold_191_9
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14345..16057
DNA (1713bp) protein (571aa)
UPI0003D5B98F related cluster n=1 Tax=unknown RepID=UPI0003D5B98F
Uncharacterized protein {ECO:0000313|EMBL:ETI83697.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
NADH/Ubiquinone/plastoquinone (complex I)
L2_047_064G1_scaffold_191_10
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16050..16859
DNA (810bp) protein (270aa)
UPI0003D640E7 related cluster n=1 Tax=unknown RepID=UPI0003D640E7
Uncharacterized protein {ECO:0000313|EMBL:ETI83698.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
multisubunit Na+/H+ antiporter MnhE subunit-like protein
L2_047_064G1_scaffold_191_11
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16865..17215
DNA (351bp) protein (117aa)
UPI0003D63B7D related cluster n=1 Tax=unknown RepID=UPI0003D63B7D
Uncharacterized protein {ECO:0000313|EMBL:ETI83699.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
multisubunit Na+/H+ antiporter subunit MnhF
L2_047_064G1_scaffold_191_12
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17208..17591
DNA (384bp) protein (128aa)
UPI0003D6418C related cluster n=1 Tax=unknown RepID=UPI0003D6418C
Uncharacterized protein {ECO:0000313|EMBL:ETI83700.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
monovalent cation/proton antiporter, MnhG/PhaG subunit
L2_047_064G1_scaffold_191_13
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17808..19223
DNA (1416bp) protein (472aa)
UPI0003D64F91 related cluster n=1 Tax=unknown RepID=UPI0003D64F91
Uncharacterized protein {ECO:0000313|EMBL:ETI83701.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
ATPase
L2_047_064G1_scaffold_191_14
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20154..20243)
DNA (90bp) protein (30aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI82993.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_047_064G1_scaffold_191_15
unknown

Not on your lists

comp(20301..20393)
DNA (93bp) protein (31aa)

This feature has no annotations

L2_047_064G1_scaffold_191_16
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22288..23244)
DNA (957bp) protein (319aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
UPI0003D64F37 related cluster n=1 Tax=unknown RepID=UPI0003D64F37
CRISPR-associated protein Cas1
L2_047_064G1_scaffold_191_17
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23252..23959)
DNA (708bp) protein (236aa)
UPI0003D5AED8 related cluster n=1 Tax=unknown RepID=UPI0003D5AED8
Cse3 family CRISPR-associated protein {ECO:0000313|EMBL:ETI83706.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Cse3 family CRISPR-associated protein
L2_047_064G1_scaffold_191_18
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23956..24795)
DNA (840bp) protein (280aa)
UPI0003D64D32 related cluster n=1 Tax=unknown RepID=UPI0003D64D32
CRISPR-associated protein cas5, subtype {ECO:0000313|EMBL:ETI83707.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
CRISPR-associated Cas5 family protein
L2_047_064G1_scaffold_191_19
Actinomyces viscosus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24798..25955)
DNA (1158bp) protein (386aa)
CRISPR-associated protein Cse4 n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B32968
CRISPR-associated protein cas7/cse4/casc, subtype I-e {ECO:0000313|EMBL:EQM96886.1}; TaxID=562973 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces viscosus C505.;"
CRISPR-associated Cse4 family protein
L2_047_064G1_scaffold_191_20
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25967..26599)
DNA (633bp) protein (211aa)
CRISPR system CASCADE complex protein CasB n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LKN8_9FIRM
CRISPR system CASCADE complex protein CasB {ECO:0000313|EMBL:EFU77567.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerobaculum saburreum DSM 3986.;"
L2_047_064G1_scaffold_191_21
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26592..28352)
DNA (1761bp) protein (587aa)
CRISPR type I-e/-associated protein casa/cse1 n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2WFP9_9ACTO
CRISPR type I-e/-associated protein casa/cse1 {ECO:0000313|EMBL:EPD31447.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
CRISPR-associated Cse1 family protein
L2_047_064G1_scaffold_191_22
Actinomyces europaeus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28499..31537)
DNA (3039bp) protein (1013aa)
CRISPR-associated helicase cas3 n=1 Tax=Actinomyces europaeus ACS-120-V-Col10b RepID=S2VX89_9ACTO
CRISPR-associated helicase cas3 {ECO:0000313|EMBL:EPD31446.1}; TaxID=883069 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces europaeus ACS-120-V-Col10b.;"
CRISPR-associated helicase Cas3 family protein
L2_047_064G1_scaffold_191_23
Mobiluncus curtisii, Mobiluncus, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31768..34272
DNA (2505bp) protein (835aa)
Uncharacterized protein n=1 Tax=Mobiluncus curtisii ATCC 51333 RepID=E6LXR0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFU80427.1}; TaxID=887326 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Mobiluncus.;" source="Mobiluncus curtisii ATCC 51333.;"
hypothetical protein
L2_047_064G1_scaffold_191_24
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34489..35241)
DNA (753bp) protein (251aa)
UPI0003D5A9D9 related cluster n=1 Tax=unknown RepID=UPI0003D5A9D9
Integral membrane protein {ECO:0000313|EMBL:ETI83709.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
integral membrane protein
L2_047_064G1_scaffold_191_25
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35680..36651)
DNA (972bp) protein (324aa)
PfkB family ribokinase (EC:2.7.1.15)
UPI0003D5F776 related cluster n=1 Tax=unknown RepID=UPI0003D5F776
Putative ribokinase {ECO:0000313|EMBL:ETI83710.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
L2_047_064G1_scaffold_191_26
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36679..37671)
DNA (993bp) protein (331aa)
UPI0003D5A344 related cluster n=1 Tax=unknown RepID=UPI0003D5A344
LacI family transcriptional regulator {ECO:0000313|EMBL:ETI83711.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rbsR; LacI family transcriptional regulator
L2_047_064G1_scaffold_191_27
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37703..39100)
DNA (1398bp) protein (466aa)
UPI0003D6829E related cluster n=1 Tax=unknown RepID=UPI0003D6829E
Uncharacterized protein {ECO:0000313|EMBL:ETI83712.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_047_064G1_scaffold_191_28
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39100..40044)
DNA (945bp) protein (315aa)
UPI0003D631CE related cluster n=1 Tax=unknown RepID=UPI0003D631CE
Uncharacterized protein {ECO:0000313|EMBL:ETI83713.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
rihB; ribonucleoside hydrolase
L2_047_064G1_scaffold_191_29
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(40276..41982)
DNA (1707bp) protein (569aa)
UPI0003D5C61B related cluster n=1 Tax=unknown RepID=UPI0003D5C61B
Uncharacterized protein {ECO:0000313|EMBL:ETI83714.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
hypothetical protein
L2_047_064G1_scaffold_191_30
Varibaculum cambriense, Varibaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42085..43203)
DNA (1119bp) protein (373aa)
UPI0003D5BD01 related cluster n=1 Tax=unknown RepID=UPI0003D5BD01
Uncharacterized protein {ECO:0000313|EMBL:ETI83715.1}; TaxID=1403948 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Varibaculum.;" source="Varibaculum cambriense DORA_20.;"
Phosphotransferase enzyme family.
Displaying items 1-30 of 37 in total

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