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L2_047_064G1_scaffold_275

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Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_064G1_scaffold_275_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(58..747)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M5T8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX63442.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
membrane protein
L2_047_064G1_scaffold_275_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

952..1296
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=T5LNY7_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX63443.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L2_047_064G1_scaffold_275_3
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1904..2452)
DNA (549bp) protein (183aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000256|HAMAP-Rule:MF_01437}; EC=2.7.8.5 {ECO:0000256|HAMAP-Rule:MF_01437};; Phosphatidylglycerophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01437}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=7 Tax=Enterobacteriaceae RepID=C1M5U5_9ENTR
phosphatidylglycerophosphate synthetase
L2_047_064G1_scaffold_275_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2508..4340)
DNA (1833bp) protein (611aa)
UvrABC system protein C n=2 Tax=Citrobacter RepID=C1M5U6_9ENTR
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
uvrC; excinuclease ABC subunit C
L2_047_064G1_scaffold_275_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4337..4993)
DNA (657bp) protein (219aa)
Response regulator uvrY n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SKZ6_CITFR
Response regulator uvrY {ECO:0000313|EMBL:KDF14436.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
sirA; response regulator
L2_047_064G1_scaffold_275_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5453..5677
DNA (225bp) protein (75aa)
Uncharacterized protein n=8 Tax=Citrobacter RepID=C1M5U8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL81330.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L2_047_064G1_scaffold_275_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5744..6430)
DNA (687bp) protein (229aa)
DNA-binding transcriptional activator SdiA n=7 Tax=Citrobacter RepID=J0LXW8_9ENTR
Regulatory protein SdiA {ECO:0000313|EMBL:ETX69289.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
LuxR family transcriptional regulator
L2_047_064G1_scaffold_275_8
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6697..7449)
DNA (753bp) protein (251aa)
Uncharacterized protein n=9 Tax=Citrobacter RepID=C1M5V0_9ENTR
amino acid ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EOQ48326.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
L2_047_064G1_scaffold_275_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7446..8114)
DNA (669bp) protein (223aa)
Inner membrane amino-acid ABC transporter permease yecS n=10 Tax=Citrobacter RepID=C1M5V1_9ENTR
Amino acid ABC transporter permease {ECO:0000313|EMBL:KJC08793.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
amino acid ABC transporter permease
L2_047_064G1_scaffold_275_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8136..9122)
DNA (987bp) protein (329aa)
D-cysteine desulfhydrase {ECO:0000256|HAMAP-Rule:MF_01045}; EC=4.4.1.15 {ECO:0000256|HAMAP-Rule:MF_01045};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
cysteine desulfhydrase (EC:4.4.1.15)
D-cysteine desulfhydrase n=5 Tax=Citrobacter RepID=J0LRM3_9ENTR
L2_047_064G1_scaffold_275_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9230..10030)
DNA (801bp) protein (267aa)
Cystine-binding periplasmic protein n=8 Tax=Citrobacter RepID=C1M5V3_9ENTR
Cystine-binding periplasmic protein {ECO:0000313|EMBL:ETX69293.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
cystine transporter subunit
L2_047_064G1_scaffold_275_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10131..10682)
DNA (552bp) protein (184aa)
Flagellar regulatory protein FliZ n=1 Tax=Citrobacter sp. KTE30 RepID=R8UW73_9ENTR
Flagella biosynthesis protein FliZ {ECO:0000313|EMBL:KJC08796.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
flagella biosynthesis protein FliZ
L2_047_064G1_scaffold_275_13
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10740..11459)
DNA (720bp) protein (240aa)
RNA polymerase sigma factor FliA n=3 Tax=Citrobacter RepID=R8VFE8_9ENTR
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
fliA; flagellar biosynthesis sigma factor
L2_047_064G1_scaffold_275_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11622..13133)
DNA (1512bp) protein (504aa)
Flagellin n=1 Tax=Escherichia coli RepID=Q6VMU2_ECOLX
Flagellin {ECO:0000313|EMBL:AAQ22687.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
fliC; flagellin
L2_047_064G1_scaffold_275_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13389..14789
DNA (1401bp) protein (467aa)
Flagellar hook-associated protein 2 n=1 Tax=Citrobacter sp. KTE30 RepID=R8UW78_9ENTR
Flagellar hook-associated protein 2 {ECO:0000313|EMBL:ETX63457.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
fliD; flagellar filament cap protein
L2_047_064G1_scaffold_275_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14805..15212
DNA (408bp) protein (136aa)
Flagellar protein FliS n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QT40_CITFR
Flagellar protein FliS {ECO:0000313|EMBL:KJC08800.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fliS; flagellar protein FliS
L2_047_064G1_scaffold_275_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15212..15583
DNA (372bp) protein (124aa)
Flagellar protein FliT n=1 Tax=Citrobacter sp. 30_2 RepID=C1M5V9_9ENTR
Flagellar protein FliT {ECO:0000256|HAMAP-Rule:MF_01180, ECO:0000256|SAAS:SAAS00068921}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
flagellar biosynthesis protein FliT
L2_047_064G1_scaffold_275_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15652..17139
DNA (1488bp) protein (496aa)
cytoplasmic alpha-amylase (EC:3.2.1.1)
Cytoplasmic alpha-amylase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M5W0_9ENTR
Cytoplasmic alpha-amylase {ECO:0000313|EMBL:ETX63460.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L2_047_064G1_scaffold_275_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17180..17593)
DNA (414bp) protein (138aa)
Uncharacterized protein n=7 Tax=Citrobacter RepID=J1FVK7_9ENTR
Lipoprotein {ECO:0000313|EMBL:KJC08803.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
lipoprotein
L2_047_064G1_scaffold_275_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17779..18984
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QXQ6_CITFR
Inner membrane protein {ECO:0000313|EMBL:ETX69302.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_047_064G1_scaffold_275_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18981..19214
DNA (234bp) protein (78aa)
UPF0033 protein YedF n=1782 Tax=Enterobacteriaceae RepID=YEDF_ECO57
yedF; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBG34916.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
L2_047_064G1_scaffold_275_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19269..19583)
DNA (315bp) protein (105aa)
Flagellar hook-basal body complex protein FliE n=7 Tax=Citrobacter RepID=C1M5X1_9ENTR
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
fliE; flagellar hook-basal body protein FliE
L2_047_064G1_scaffold_275_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19800..21473
DNA (1674bp) protein (558aa)
Flagellar M-ring protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M5X3_9ENTR
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
flagellar M-ring protein FliF
L2_047_064G1_scaffold_275_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21466..22464
DNA (999bp) protein (333aa)
Flagellar motor switch protein FliG n=9 Tax=Enterobacteriaceae RepID=C1M5X4_9ENTR
fliG; flagellar motor switch protein G
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
L2_047_064G1_scaffold_275_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22457..23164
DNA (708bp) protein (236aa)
Flagellar assembly protein fliH n=2 Tax=Citrobacter RepID=C1M5X5_9ENTR
Flagellar assembly protein fliH {ECO:0000313|EMBL:ETX63468.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
fliH; flagellar assembly protein H
L2_047_064G1_scaffold_275_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23164..24534
DNA (1371bp) protein (457aa)
ATP synthase {ECO:0000313|EMBL:KJC10378.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KJC10378.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fliI; ATP synthase (EC:3.6.3.14)
Flagellum-specific ATP synthase n=6 Tax=Citrobacter RepID=C1M5X6_9ENTR
L2_047_064G1_scaffold_275_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24556..24999
DNA (444bp) protein (148aa)
Flagellar fliJ protein n=2 Tax=Citrobacter RepID=C1M5X7_9ENTR
Flagellar FliJ protein {ECO:0000256|PIRNR:PIRNR019404}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
fliJ; flagellar biosynthesis chaperone
L2_047_064G1_scaffold_275_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24996..26210
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M5X8_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX63471.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
flagellar hook-length control protein
L2_047_064G1_scaffold_275_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26315..26782
DNA (468bp) protein (156aa)
Flagellar protein FliL n=2 Tax=Citrobacter RepID=C1M5X9_9ENTR
Flagellar protein FliL {ECO:0000313|EMBL:ETX63472.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
fliL; flagellar basal body-associated protein FliL
L2_047_064G1_scaffold_275_30
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26787..27791
DNA (1005bp) protein (335aa)
Flagellar motor switch protein FliM n=1 Tax=Shigella flexneri 1235-66 RepID=I6H2V1_SHIFL
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. CIP 55.13.;"
fliM; flagellar motor switch protein FliM
Displaying items 1-30 of 45 in total

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