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L2_047_064G1_scaffold_293

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_064G1_scaffold_293_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1239..1688
DNA (450bp) protein (150aa)
Glutamate mutase sigma subunit {ECO:0000256|HAMAP-Rule:MF_00526}; EC=5.4.99.1 {ECO:0000256|HAMAP-Rule:MF_00526};; Glutamate mutase S chain {ECO:0000256|HAMAP-Rule:MF_00526}; Glutamate mutase small subunit {ECO:0000256|HAMAP-Rule:MF_00526}; Methylaspartate mutase {ECO:0000256|HAMAP-Rule:MF_00526}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
Methylaspartate mutase S chain n=8 Tax=Citrobacter RepID=C1M934_9ENTR
methylaspartate mutase
L2_047_064G1_scaffold_293_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1688..3076
DNA (1389bp) protein (463aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=C1M933_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX65253.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
glutamate mutase
L2_047_064G1_scaffold_293_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3095..4540
DNA (1446bp) protein (482aa)
Glutamate mutase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_01923}; EC=5.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01923};; Glutamate mutase E chain {ECO:0000256|HAMAP-Rule:MF_01923}; Glutamate mutase large subunit {ECO:0000256|HAMAP-Rule:MF_01923}; Methylaspartate mutase {ECO:0000256|HAMAP-Rule:MF_01923}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Methylaspartate mutase, E subunit n=2 Tax=Citrobacter RepID=C1M932_9ENTR
glutamate mutase
L2_047_064G1_scaffold_293_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4540..5781
DNA (1242bp) protein (414aa)
Methylaspartate ammonia-lyase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M931_9ENTR
Methylaspartate ammonia-lyase {ECO:0000313|EMBL:ETX65251.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
methylaspartate ammonia-lyase
L2_047_064G1_scaffold_293_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5785..7155
DNA (1371bp) protein (457aa)
Uncharacterized protein n=6 Tax=Citrobacter RepID=C1M930_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KEL77507.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
3-methylaspartate ammonia-lyase
L2_047_064G1_scaffold_293_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7152..7469
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SH19_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX65249.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
acyl-CoA synthetase
L2_047_064G1_scaffold_293_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7639..8943
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M928_9ENTR
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KJC08354.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
C4-dicarboxylate ABC transporter
L2_047_064G1_scaffold_293_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9040..10041
DNA (1002bp) protein (334aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
glutaminase (EC:3.5.1.2)
Glutaminase n=5 Tax=Citrobacter RepID=J0VVC1_9ENTR
L2_047_064G1_scaffold_293_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10151..11803
DNA (1653bp) protein (551aa)
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SH16_CITFR
Fumarate hydratase {ECO:0000313|EMBL:ETX65246.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
fumarate hydratase
L2_047_064G1_scaffold_293_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11813..12415
DNA (603bp) protein (201aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:KEL77512.1}; EC=2.5.1.17 {ECO:0000313|EMBL:KEL77512.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase (EC:2.5.1.17)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=3 Tax=Citrobacter RepID=J0M2M5_9ENTR
L2_047_064G1_scaffold_293_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12498..13400)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M924_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX72784.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
LysR family transcriptional regulator
L2_047_064G1_scaffold_293_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13806..14594
DNA (789bp) protein (263aa)
uroporphyrin-III methyltransferase (EC:2.1.1.107)
Uroporphyrinogen-III C-methyltransferase n=2 Tax=Citrobacter RepID=C1M923_9ENTR
Uroporphyrinogen-III C-methyltransferase {ECO:0000313|EMBL:ETX65243.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L2_047_064G1_scaffold_293_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14573..15466)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M922_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX65242.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
transcriptional regulator
L2_047_064G1_scaffold_293_14
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15778..16647)
DNA (870bp) protein (290aa)
succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
Succinyl-CoA ligase [ADP-forming] subunit alpha n=11 Tax=Citrobacter RepID=C1M913_9ENTR
L2_047_064G1_scaffold_293_15
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16647..17813)
DNA (1167bp) protein (389aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri 1235-66.;"
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta n=11 Tax=Enterobacteriaceae RepID=C1M912_9ENTR
L2_047_064G1_scaffold_293_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17904..19127)
DNA (1224bp) protein (408aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
dihydrolipoamide succinyltransferase (EC:2.3.1.61)
Dihydrolipoamide acetyltransferase n=8 Tax=Citrobacter RepID=J1G6H2_9ENTR
L2_047_064G1_scaffold_293_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19142..21943)
DNA (2802bp) protein (934aa)
2-oxoglutarate dehydrogenase E1 component n=2 Tax=Citrobacter RepID=C1M910_9ENTR
2-oxoglutarate dehydrogenase E1 component {ECO:0000313|EMBL:ETX65230.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
2-oxoglutarate dehydrogenase
L2_047_064G1_scaffold_293_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22209..22925)
DNA (717bp) protein (239aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Succinate dehydrogenase iron-sulfur subunit n=11 Tax=Citrobacter RepID=C1M909_9ENTR
sdhB; succinate dehydrogenase
L2_047_064G1_scaffold_293_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22941..24707)
DNA (1767bp) protein (589aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Succinate dehydrogenase flavoprotein subunit n=2 Tax=Citrobacter RepID=C1M908_9ENTR
sdhA; succinate dehydrogenase
L2_047_064G1_scaffold_293_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24707..25054)
DNA (348bp) protein (116aa)
sdhD; succinate dehydrogenase (EC:1.3.5.1)
Succinate dehydrogenase hydrophobic membrane anchor subunit n=2 Tax=Citrobacter RepID=C1M907_9ENTR
Succinate dehydrogenase hydrophobic membrane anchor subunit {ECO:0000313|EMBL:ETX65227.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L2_047_064G1_scaffold_293_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25048..25452)
DNA (405bp) protein (135aa)
Succinate dehydrogenase {ECO:0000313|EMBL:KJC10836.1}; EC=1.3.5.1 {ECO:0000313|EMBL:KJC10836.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
sdhC; succinate dehydrogenase (EC:1.3.5.1)
Succinate dehydrogenase cytochrome b556 subunit n=8 Tax=Citrobacter RepID=C1M906_9ENTR
L2_047_064G1_scaffold_293_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26150..27433
DNA (1284bp) protein (428aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
gltA; type II citrate synthase (EC:2.3.3.1)
Citrate synthase n=4 Tax=Citrobacter RepID=G9SH03_CITFR
L2_047_064G1_scaffold_293_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27609..28655
DNA (1047bp) protein (349aa)
Protein AbrB n=1 Tax=Citrobacter sp. 30_2 RepID=C1M903_9ENTR
Protein AbrB {ECO:0000313|EMBL:ETX65224.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
AbrB family transcriptional regulator
L2_047_064G1_scaffold_293_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28652..29443)
DNA (792bp) protein (264aa)
Endonuclease 8 n=1 Tax=Citrobacter sp. 30_2 RepID=C1M902_9ENTR
Endonuclease 8 {ECO:0000256|HAMAP-Rule:MF_01253}; DNA glycosylase/AP lyase Nei {ECO:0000256|HAMAP-Rule:MF_01253}; DNA-(apurinic or apyrimidinic site) lyase Nei {ECO:0000256|HAMAP-Rule:MF_01253}; Endonuclease VIII {ECO:0000256|HAMAP-Rule:MF_01253}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
endonuclease VIII
L2_047_064G1_scaffold_293_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29458..30102)
DNA (645bp) protein (215aa)
Pyrrolidone-carboxylate peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; EC=3.4.19.3 {ECO:0000256|HAMAP-Rule:MF_00417};; 5-oxoprolyl-peptidase {ECO:0000256|HAMAP-Rule:MF_00417}; Pyroglutamyl-peptidase I {ECO:0000256|HAMAP-Rule:MF_00417}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Pyrrolidone-carboxylate peptidase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M901_9ENTR
pyrrolidone-carboxylate peptidase
L2_047_064G1_scaffold_293_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30112..31107)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M900_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX65221.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
membrane protein
L2_047_064G1_scaffold_293_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31104..31826)
DNA (723bp) protein (241aa)
Uncharacterized protein n=4 Tax=Citrobacter RepID=C1M8Z9_9ENTR
membrane protein
Membrane protein {ECO:0000313|EMBL:AHY12521.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii CFNIH1.;"
L2_047_064G1_scaffold_293_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31882..32616)
DNA (735bp) protein (245aa)
UPF0271 protein CSAG_00488 n=1 Tax=Citrobacter sp. 30_2 RepID=C1M8Z8_9ENTR
UPF0271 protein P835_01145 {ECO:0000256|HAMAP-Rule:MF_00691}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
LamB/YcsF family protein
L2_047_064G1_scaffold_293_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32606..33538)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M8Z7_9ENTR
Urea amidolyase {ECO:0000313|EMBL:ETX65218.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L2_047_064G1_scaffold_293_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33532..34188)
DNA (657bp) protein (219aa)
TIGR00370 family protein n=2 Tax=Citrobacter RepID=C1M8Z6_9ENTR
Carboxylase {ECO:0000313|EMBL:ETX65217.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
Displaying items 1-30 of 33 in total

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