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L2_047_064G1_scaffold_320

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Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_064G1_scaffold_320_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1894
DNA (1893bp) protein (631aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=1268976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113290.;"
ATP-dependent RNA helicase DeaD n=1 Tax=Escherichia coli MS 187-1 RepID=D7ZTR1_ECOLX
deaD; ATP-dependent RNA helicase DeaD
L2_047_064G1_scaffold_320_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2048..3292
DNA (1245bp) protein (415aa)
Tryptophan-specific transport protein n=32 Tax=Escherichia coli RepID=B3IEZ7_ECOLX
Tryptophan permease {ECO:0000313|EMBL:ETE26258.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LAU-EC10.;"
mtr; tryptophan permease
L2_047_064G1_scaffold_320_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3410..4417)
DNA (1008bp) protein (336aa)
Uncharacterized protein yhbW n=27 Tax=Escherichia coli RepID=E2QEJ5_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KDG92790.1}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
L2_047_064G1_scaffold_320_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4498..5376)
DNA (879bp) protein (293aa)
Uncharacterized protein YhbV n=207 Tax=Enterobacteriaceae RepID=YHBV_ECOLI
yhbV; protease
Protease {ECO:0000313|EMBL:KDV63470.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O128:H2 str. 2011C-3317.;"
L2_047_064G1_scaffold_320_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5385..6380)
DNA (996bp) protein (332aa)
U32 family peptidase (EC:3.4.-.-)
Peptidase, U32 family n=251 Tax=Enterobacteriaceae RepID=A7ZS53_ECO24
Protease {ECO:0000313|EMBL:ESP07503.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
L2_047_064G1_scaffold_320_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6589..7113
DNA (525bp) protein (175aa)
Uncharacterized protein n=27 Tax=Escherichia coli RepID=H1BXG8_ECOLX
yhbT; putative lipid carrier protein
Uncharacterized protein {ECO:0000313|EMBL:EGP23422.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli PCN033.;"
L2_047_064G1_scaffold_320_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7107..7610
DNA (504bp) protein (168aa)
Uncharacterized N-acetyltransferase YhbS n=1340 Tax=Enterobacteriaceae RepID=YHBS_ECO57
yhbS; hypothetical protein
Acyltransferase {ECO:0000313|EMBL:EQZ98233.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L2_047_064G1_scaffold_320_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7597..7899)
DNA (303bp) protein (101aa)
UPF0213 protein YhbQ n=15 Tax=Enterobacteriaceae RepID=YHBQ_SHIDS
yhbQ; GIY-YIG nuclease superfamily protein
UPF0213 protein YhbQ {ECO:0000256|HAMAP-Rule:MF_01029}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3200-1.;"
L2_047_064G1_scaffold_320_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7950..8393
DNA (444bp) protein (148aa)
UPF0306 protein YhbP n=38 Tax=Escherichia coli RepID=YHBP_ECO81
yhbP; hypothetical protein
UPF0306 protein YhbP {ECO:0000256|HAMAP-Rule:MF_00764}; TaxID=1182673 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE66.;"
L2_047_064G1_scaffold_320_10
Shigella sonnei, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8373..8891)
DNA (519bp) protein (173aa)
Protein YhbO n=1 Tax=Escherichia coli TA280 RepID=F4V6Q2_ECOLX
intracellular peptidase, PfpI family
Uncharacterized protein {ECO:0000313|EMBL:AAZ89874.1}; TaxID=300269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella sonnei (strain Ss046).;"
L2_047_064G1_scaffold_320_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9019..9654
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=D3QSM4_ECOCB
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFF11789.2}; TaxID=550677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B354.;"
L2_047_064G1_scaffold_320_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9727..10767
DNA (1041bp) protein (347aa)
UPI0003D5B1A4 related cluster n=1 Tax=unknown RepID=UPI0003D5B1A4
Uncharacterized protein {ECO:0000313|EMBL:ETJ24812.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DORA_A_5_14_21.;"
yraQ; putative permease
L2_047_064G1_scaffold_320_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10889..11464)
DNA (576bp) protein (192aa)
Phospholipid-binding domain protein n=114 Tax=Escherichia coli RepID=B1LFQ1_ECOSM
putative phospholipid-binding protein
Putative periplasmic protein {ECO:0000313|EMBL:EGI39523.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
L2_047_064G1_scaffold_320_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11474..12064)
DNA (591bp) protein (197aa)
DnaA initiator-associating protein DiaA n=768 Tax=Enterobacteriaceae RepID=DIAA_ECO24
putative phosphoheptose isomerase
DnaA initiator-associating protein DiaA {ECO:0000256|HAMAP-Rule:MF_01157, ECO:0000256|SAAS:SAAS00014432}; TaxID=1438695 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UCI 65.;"
L2_047_064G1_scaffold_320_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12084..12479)
DNA (396bp) protein (132aa)
UPF0102 protein YraN n=101 Tax=Enterobacteriaceae RepID=YRAN_ECO7I
hypothetical protein
UPF0102 protein YraN {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L2_047_064G1_scaffold_320_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12437..14473)
DNA (2037bp) protein (679aa)
Penicillin-binding protein activator LpoA n=3 Tax=Escherichia coli RepID=L4E464_ECOLX
Penicillin-binding protein activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890}; Short=PBP activator LpoA {ECO:0000256|HAMAP-Rule:MF_01890};; Flags: Precursor;; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
yraM; hypothetical protein
L2_047_064G1_scaffold_320_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14538..15401
DNA (864bp) protein (288aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
Ribosomal RNA small subunit methyltransferase I n=123 Tax=Escherichia coli RepID=E2QEI2_ECOLX
hypothetical protein
L2_047_064G1_scaffold_320_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15451..16164)
DNA (714bp) protein (238aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1444135 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C1.;"
Glucosamine-6-phosphate deaminase n=2 Tax=Escherichia coli RepID=L3JQ80_ECOLX
agaI; galactosamine-6-phosphate isomerase
L2_047_064G1_scaffold_320_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16219..17010)
DNA (792bp) protein (264aa)
Galactosamine-specific PTS system enzyme IID component n=1112 Tax=Enterobacteriaceae RepID=C3ST22_ECOLX
agaD2; PTS system N-acetylgalactosamine-specific transporter subunit IID
N-acetylgalactosamine permease IID component {ECO:0000313|EMBL:EFZ59232.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
L2_047_064G1_scaffold_320_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17000..17803)
DNA (804bp) protein (268aa)
N-acetylgalactosamine permease IIC component 1 n=625 Tax=Enterobacteriaceae RepID=PTPC1_ECOLI
PTS system N-acetylgalactosamine-specific transporter subunit IIC
N-acetylgalactosamine permease IIC component 1 {ECO:0000313|EMBL:EHP65754.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
L2_047_064G1_scaffold_320_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17842..18318)
DNA (477bp) protein (159aa)
agaB; PTS system N-acetylgalactosamine-specific transporter subunit IIB (EC:2.7.1.69)
Galactosamine-specific PTS system enzyme IIB component n=699 Tax=Escherichia RepID=C3ST27_ECOLX
Galactosamine-specific PTS system enzyme IIB component {ECO:0000313|EMBL:KDW73309.1}; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S1_C1.;"
L2_047_064G1_scaffold_320_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18485..19345)
DNA (861bp) protein (287aa)
kbaY; tagatose-bisphosphate aldolase (EC:4.1.2.40)
D-tagatose-1,6-bisphosphate aldolase subunit KbaY {ECO:0000256|HAMAP-Rule:MF_01293}; Short=TBPA {ECO:0000256|HAMAP-Rule:MF_01293};; Short=TagBP aldolase {ECO:0000256|HAMAP-Rule:MF_01293};; EC=4.1.2.40 {ECO:0000256|HAMAP-Rule:MF_01293};; D-tagatose-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Ketose 1,6-bisphosphate aldolase class II {ECO:0000256|HAMAP-Rule:MF_01293}; Tagatose-bisphosphate aldolase {ECO:0000256|HAMAP-Rule:MF_01293}; TaxID=1268985 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907710.;"
D-tagatose-1,6-bisphosphate aldolase subunit KbaY n=1141 Tax=Enterobacteriaceae RepID=KBAY_ECO24
L2_047_064G1_scaffold_320_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19358..20512)
DNA (1155bp) protein (385aa)
agaS; putative tagatose-6-phosphate ketose/aldose isomerase (EC:5.-.-.-)
Putative tagatose-6-phosphate ketose/aldose isomerase {ECO:0000313|EMBL:CBG36256.1}; EC=5.-.-.- {ECO:0000313|EMBL:CBG36256.1};; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
Tagatose-6-phosphate ketose/aldose isomerase n=6 Tax=Escherichia coli RepID=L3Y509_ECOLX
L2_047_064G1_scaffold_320_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20863..21996)
DNA (1134bp) protein (378aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1169340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE21.;"
N-acetylglucosamine-6-phosphate deacetylase n=9 Tax=Escherichia coli RepID=L2XBI7_ECOLX
N-acetylglucosamine-6-phosphate deacetylase
L2_047_064G1_scaffold_320_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21993..22427)
DNA (435bp) protein (145aa)
putative phosphotransferase system enzyme subunit (N-acetyl-galactosamine / galactosamine PTS system enzyme IIA component) (EC:2.7.1.69)
PTS system, mannose/sorbose-specific, IIA component n=59 Tax=Escherichia coli RepID=B1LFN9_ECOSM
PTS system, mannose/fructose/sorbose family, IIA component {ECO:0000313|EMBL:EOV03095.1}; TaxID=1169355 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE38.;"
L2_047_064G1_scaffold_320_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22445..23323)
DNA (879bp) protein (293aa)
PTS system N-acetylgalactosamine-specific, IID component n=765 Tax=Enterobacteriaceae RepID=A8A4U9_ECOHS
PTS system hexose/hexosamine family transporter permease IID
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:EIG80754.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L2_047_064G1_scaffold_320_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23313..24092)
DNA (780bp) protein (260aa)
N-acetylgalactosamine permease IIC component 2 n=1162 Tax=Enterobacteriaceae RepID=C3ST47_ECOLX
agaW; PTS system N-acetylgalactosamine-specific transporter subunit IIC
PTS system sorbose-specific iic component family protein {ECO:0000313|EMBL:KDX47003.1}; TaxID=1444151 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C2.;"
L2_047_064G1_scaffold_320_28
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24103..24576)
DNA (474bp) protein (158aa)
N-acetylgalactosamine-specific PTS system enzyme IIB component n=53 Tax=Enterobacteriaceae RepID=C3ST55_ECOLX
agaV; acetylgalactosamine-specific PTS system enzyme IIB component
Galactosamine-specific PTS system enzyme IIB component {ECO:0000313|EMBL:EIQ26206.1}; TaxID=766138 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii 965-58.;"
L2_047_064G1_scaffold_320_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24599..25879)
DNA (1281bp) protein (427aa)
agaZ; putative tagatose 6-phosphate kinase (EC:2.7.1.144)
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ n=17 Tax=Escherichia coli RepID=D3GWU7_ECO44
D-tagatose-1,6-bisphosphate aldolase subunit KbaZ {ECO:0000256|HAMAP-Rule:MF_01295}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
L2_047_064G1_scaffold_320_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26128..26937
DNA (810bp) protein (270aa)
Transcriptional regulator, DeoR family n=139 Tax=Enterobacteriaceae RepID=B1LFN4_ECOSM
agaR; DNA-binding transcriptional regulator AgaR
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EFJ81314.1}; TaxID=749531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 69-1.;"
Displaying items 1-30 of 37 in total

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