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L2_047_064G1_scaffold_418

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_064G1_scaffold_418_1
unknown

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1..129
DNA (129bp) protein (43aa)

This feature has no annotations

L2_047_064G1_scaffold_418_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(136..777)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M454_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX64708.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
DNA-binding protein
L2_047_064G1_scaffold_418_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(905..1873)
DNA (969bp) protein (323aa)
serine dehydratase (EC:4.3.1.19)
Serine racemase n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SIX9_CITFR
Serine racemase {ECO:0000313|EMBL:ETX70772.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
L2_047_064G1_scaffold_418_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1901..2296)
DNA (396bp) protein (132aa)
Putative endoribonuclease L-PSP n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SIY0_CITFR
Uncharacterized protein {ECO:0000313|EMBL:ETX64710.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
endoribonuclease L-PSP
L2_047_064G1_scaffold_418_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2541..2849)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M457_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX64711.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
monooxygenase
L2_047_064G1_scaffold_418_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2886..3677)
DNA (792bp) protein (264aa)
Phenazine biosynthesis protein PhzF family protein n=1 Tax=Citrobacter freundii 4_7_47CFAA RepID=G9SIY2_CITFR
Isomerase {ECO:0000313|EMBL:KJC12446.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
isomerase
L2_047_064G1_scaffold_418_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3807..4505
DNA (699bp) protein (233aa)
Pseudouridine synthase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M459_9ENTR
Pseudouridylate synthase {ECO:0000313|EMBL:ETX64713.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
pseudouridylate synthase
L2_047_064G1_scaffold_418_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4543..5916)
DNA (1374bp) protein (458aa)
Multidrug resistance protein MdtK n=1 Tax=Citrobacter sp. 30_2 RepID=C1M460_9ENTR
Multidrug resistance protein MdtK {ECO:0000256|HAMAP-Rule:MF_00400, ECO:0000256|SAAS:SAAS00182200}; Multidrug-efflux transporter {ECO:0000256|HAMAP-Rule:MF_00400}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
multidrug transporter
L2_047_064G1_scaffold_418_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6134..6781
DNA (648bp) protein (216aa)
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:KJC09335.1}; EC=2.5.1.9 {ECO:0000313|EMBL:KJC09335.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase alpha chain n=4 Tax=Citrobacter RepID=C1M461_9ENTR
L2_047_064G1_scaffold_418_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6823..7971)
DNA (1149bp) protein (383aa)
cyclopropane fatty acyl phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Citrobacter sp. 30_2 RepID=C1M462_9ENTR
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:ETX64716.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
L2_047_064G1_scaffold_418_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8262..9467)
DNA (1206bp) protein (402aa)
Transporter n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3BNR0_CITFR
Inner membrane transporter ydhC {ECO:0000313|EMBL:ETX64717.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
transporter
L2_047_064G1_scaffold_418_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9580..10512
DNA (933bp) protein (311aa)
Uncharacterized protein n=5 Tax=Citrobacter RepID=C1M464_9ENTR
Hypothetical lysR-family transcriptional regulator YdhB {ECO:0000313|EMBL:CDL41551.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
transcriptional regulator
L2_047_064G1_scaffold_418_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10509..11534)
DNA (1026bp) protein (342aa)
HTH-type transcriptional repressor PurR n=5 Tax=Citrobacter RepID=C1M465_9ENTR
HTH-type transcriptional repressor PurR {ECO:0000256|HAMAP-Rule:MF_01277, ECO:0000256|SAAS:SAAS00011512}; Pur regulon repressor {ECO:0000256|HAMAP-Rule:MF_01277}; Purine nucleotide synthesis repressor {ECO:0000256|HAMAP-Rule:MF_01277}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
transcriptional regulator
L2_047_064G1_scaffold_418_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11832..11921
DNA (90bp) protein (30aa)
Uncharacterized protein n=9 Tax=Citrobacter RepID=C1M466_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX70783.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L2_047_064G1_scaffold_418_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12097..13266
DNA (1170bp) protein (390aa)
Inner membrane transporter ydhP n=1 Tax=Citrobacter sp. 30_2 RepID=C1M467_9ENTR
Inner membrane transporter ydhP {ECO:0000313|EMBL:ETX64721.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
MFS transporter
L2_047_064G1_scaffold_418_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13306..13887)
DNA (582bp) protein (194aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Superoxide dismutase n=8 Tax=Citrobacter RepID=C1M468_9ENTR
superoxide dismutase
L2_047_064G1_scaffold_418_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14015..14845)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. 30_2 RepID=C1M469_9ENTR
NLP/P60 protein {ECO:0000313|EMBL:ETX64723.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
endopeptidase
L2_047_064G1_scaffold_418_18
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15180..15527
DNA (348bp) protein (116aa)
Glutaredoxin n=34 Tax=Enterobacteriaceae RepID=D5CBR5_ENTCC
glutaredoxin
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
L2_047_064G1_scaffold_418_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15581..16228)
DNA (648bp) protein (216aa)
Ribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157, ECO:0000256|SAAS:SAAS00051933}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00157};; Exoribonuclease T {ECO:0000256|HAMAP-Rule:MF_00157}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
ribonuclease T (EC:3.1.13.-)
Ribonuclease T n=8 Tax=Citrobacter RepID=C1M471_9ENTR
L2_047_064G1_scaffold_418_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16324..16731)
DNA (408bp) protein (136aa)
Lactoylglutathione lyase {ECO:0000256|RuleBase:RU361179}; EC=4.4.1.5 {ECO:0000256|RuleBase:RU361179};; Glyoxalase I {ECO:0000256|RuleBase:RU361179}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
glyoxalase I (EC:4.4.1.5)
Lactoylglutathione lyase n=2 Tax=Citrobacter RepID=C1M472_9ENTR
L2_047_064G1_scaffold_418_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16829..17926)
DNA (1098bp) protein (366aa)
N-ethylmaleimide reductase n=7 Tax=Citrobacter RepID=J1FXN6_9ENTR
N-ethylmaleimide reductase {ECO:0000313|EMBL:ETX64727.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
N-ethylmaleimide reductase
L2_047_064G1_scaffold_418_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17981..18580)
DNA (600bp) protein (200aa)
HTH-type transcriptional repressor nemR n=2 Tax=Citrobacter freundii RepID=G9SIZ9_CITFR
HTH-type transcriptional repressor nemR {ECO:0000313|EMBL:ETX64728.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
transcriptional repressor NemR
L2_047_064G1_scaffold_418_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18682..18921
DNA (240bp) protein (80aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=C1M475_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:ETX64729.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
oxidoreductase
L2_047_064G1_scaffold_418_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18971..19867
DNA (897bp) protein (299aa)
Oxidoreductase YdhF n=1 Tax=Citrobacter sp. 30_2 RepID=C1M476_9ENTR
Oxidoreductase YdhF {ECO:0000313|EMBL:ETX70793.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
oxidoreductase
L2_047_064G1_scaffold_418_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19949..20473
DNA (525bp) protein (175aa)
Superoxide dismutase [Cu-Zn] {ECO:0000256|RuleBase:RU000393}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000393};; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
Superoxide dismutase [Cu-Zn] n=1 Tax=Citrobacter sp. 30_2 RepID=C1M477_9ENTR
superoxide dismutase
L2_047_064G1_scaffold_418_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20474..22489)
DNA (2016bp) protein (672aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=C1M478_9ENTR
Fusaric acid resistance protein {ECO:0000313|EMBL:ETX64732.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
hypothetical protein
L2_047_064G1_scaffold_418_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22486..23277)
DNA (792bp) protein (264aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Citrobacter sp. 30_2 RepID=C1M479_9ENTR
Secretion protein HlyD {ECO:0000313|EMBL:ETX64733.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
membrane protein
L2_047_064G1_scaffold_418_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23352..23588)
DNA (237bp) protein (79aa)
Uncharacterized protein n=7 Tax=Citrobacter RepID=C1M480_9ENTR
Inner membrane protein {ECO:0000313|EMBL:ETX70797.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
membrane protein
L2_047_064G1_scaffold_418_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23787..24221
DNA (435bp) protein (145aa)
Transcriptional regulator SlyA n=1 Tax=Citrobacter sp. 30_2 RepID=C1M481_9ENTR
Transcriptional regulator SlyA {ECO:0000256|HAMAP-Rule:MF_01819}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
transcriptional regulator SlyA
L2_047_064G1_scaffold_418_30
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24268..24735)
DNA (468bp) protein (156aa)
Outer membrane lipoprotein slyB n=10 Tax=Enterobacteriaceae RepID=C1M482_9ENTR
membrane protein
Outer membrane lipoprotein SlyB {ECO:0000313|EMBL:GAL44172.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter werkmanii NBRC 105721.;"
Displaying items 1-30 of 34 in total

View Taxonomy