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L2_047_064G1_scaffold_550

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_064G1_scaffold_550_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..1036
DNA (1035bp) protein (345aa)
60 kDa chaperonin n=1 Tax=Escherichia coli P0305260.3 RepID=N4FIL7_ECOLX
groL; chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L2_047_064G1_scaffold_550_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1174..1527
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Escherichia coli RepID=J7QJM7_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:CCJ46803.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
L2_047_064G1_scaffold_550_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1577..2446)
DNA (870bp) protein (290aa)
Uncharacterized protein n=111 Tax=Escherichia coli RepID=B7NG83_ECOLU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDK46703.1}; TaxID=1433131 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli IS1.;"
L2_047_064G1_scaffold_550_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2681..3709)
DNA (1029bp) protein (343aa)
yjeK; Lysine 2,3-aminomutase (EC:5.4.3.2)
Uncharacterized protein n=93 Tax=Escherichia RepID=D2NFS4_ECOS5
KamA family protein {ECO:0000313|EMBL:KEJ53521.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S4_C1.;"
L2_047_064G1_scaffold_550_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3751..4317
DNA (567bp) protein (189aa)
Elongation factor P n=1429 Tax=Enterobacteriaceae RepID=EFP_ECO24
efp; elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L2_047_064G1_scaffold_550_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4372..4494
DNA (123bp) protein (41aa)
Entericidin A n=1168 Tax=Enterobacteriaceae RepID=ECNA_ECO57
entericidin protein A
Conserved domain protein {ECO:0000313|EMBL:EGI43080.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L2_047_064G1_scaffold_550_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4605..4751
DNA (147bp) protein (49aa)
Entericidin B n=1424 Tax=Enterobacteriaceae RepID=ECNB_ECO57
ecnB; entericidin B membrane lipoprotein
Entericidin B {ECO:0000313|EMBL:EII21457.1}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 9.0111.;"
L2_047_064G1_scaffold_550_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4941..5258
DNA (318bp) protein (106aa)
Quaternary ammonium compound-resistance protein SugE n=1064 Tax=Enterobacteriaceae RepID=SUGE_ECO57
suppresser of groEL
Multidrug resistance protein, SMR family {ECO:0000313|EMBL:EFJ85752.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L2_047_064G1_scaffold_550_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5255..5788)
DNA (534bp) protein (178aa)
Outer membrane lipoprotein (Lipocalin) n=658 Tax=Enterobacteriaceae RepID=E2QK88_ECOLX
outer membrane lipoprotein
Outer membrane lipoprotein blc {ECO:0000313|EMBL:EZJ47603.1}; TaxID=1444228 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-005-03_S4_C2.;"
L2_047_064G1_scaffold_550_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5877..7010)
DNA (1134bp) protein (378aa)
ampC; beta-lactamase (EC:3.5.2.6)
Beta-lactamase {ECO:0000256|RuleBase:RU361140}; EC=3.5.2.6 {ECO:0000256|RuleBase:RU361140};; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
Beta-lactamase (Fragment) n=1 Tax=Escherichia coli MS 198-1 RepID=D7XAT4_ECOLX
L2_047_064G1_scaffold_550_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7073..7432)
DNA (360bp) protein (120aa)
Fumarate reductase subunit D n=991 Tax=Bacteria RepID=FRDD_ECO27
frdD; fumarate reductase, D subunit
Fumarate reductase subunit D {ECO:0000256|HAMAP-Rule:MF_00709, ECO:0000256|SAAS:SAAS00096033}; Fumarate reductase 13 kDa hydrophobic protein {ECO:0000256|HAMAP-Rule:MF_00709}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
L2_047_064G1_scaffold_550_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7443..7838)
DNA (396bp) protein (132aa)
Fumarate reductase subunit C n=1251 Tax=Bacteria RepID=FRDC_ECO24
frdC; fumarate reductase subunit C
Fumarate reductase subunit C {ECO:0000256|HAMAP-Rule:MF_00708, ECO:0000256|SAAS:SAAS00095967}; Fumarate reductase 15 kDa hydrophobic protein {ECO:0000256|HAMAP-Rule:MF_00708}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B7A.;"
L2_047_064G1_scaffold_550_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7849..8583)
DNA (735bp) protein (245aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
fumarate reductase iron-sulfur subunit n=1 Tax=Escherichia coli RepID=UPI00037D1C34
fumarate reductase, iron-sulfur subunit
L2_047_064G1_scaffold_550_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8576..10384)
DNA (1809bp) protein (603aa)
Fumarate reductase flavoprotein subunit {ECO:0000256|RuleBase:RU362050}; EC=1.3.5.4 {ECO:0000256|RuleBase:RU362050};; TaxID=1169376 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE112.;"
frdA; fumarate reductase flavoprotein subunit (EC:1.3.99.1)
Fumarate reductase flavoprotein subunit n=596 Tax=Enterobacteriaceae RepID=FRDA_ECOLI
L2_047_064G1_scaffold_550_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10709..11686
DNA (978bp) protein (326aa)
Elongation factor P--(R)-beta-lysine ligase {ECO:0000256|HAMAP-Rule:MF_00174, ECO:0000256|SAAS:SAAS00088906}; Short=EF-P--(R)-beta-lysine ligase {ECO:0000256|HAMAP-Rule:MF_00174};; EC=6.3.1.- {ECO:0000256|HAMAP-Rule:MF_00174, ECO:0000256|SAAS:SAAS00088909};; EF-P post-translational modification enzyme A {ECO:0000256|HAMAP-Rule:MF_00174}; EF-P-lysine lysyltransferase {ECO:0000256|HAMAP-Rule:MF_00174}; TaxID=1182725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE146.;"
Elongation factor P--(R)-beta-lysine ligase n=14 Tax=Enterobacteriaceae RepID=C3SGA2_ECOLX
genX; lysyl-tRNA synthetase-like protein GenX
L2_047_064G1_scaffold_550_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11950..13407
DNA (1458bp) protein (486aa)
Inner membrane transporter yjeM n=1 Tax=Escherichia coli 4_1_47FAA RepID=H1BTL6_ECOLX
Inner membrane transporter yjeM {ECO:0000313|EMBL:EHP67056.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
putative permease
L2_047_064G1_scaffold_550_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13517..13819
DNA (303bp) protein (101aa)
GyjeO n=17 Tax=Escherichia coli RepID=E9YWV4_ECOLX
hypothetical protein
PF10840 family protein {ECO:0000313|EMBL:EIG79638.1}; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
L2_047_064G1_scaffold_550_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13848..17171)
DNA (3324bp) protein (1108aa)
Potassium efflux system protein KefA n=4 Tax=Escherichia coli RepID=L4FNT1_ECOLX
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBG37460.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
L2_047_064G1_scaffold_550_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17193..18161)
DNA (969bp) protein (323aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00093350};; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE76.;"
psd; phosphatidylserine decarboxylase (EC:4.1.1.65)
Phosphatidylserine decarboxylase proenzyme n=13 Tax=Escherichia coli RepID=F4UGL9_ECOLX
L2_047_064G1_scaffold_550_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18258..19310)
DNA (1053bp) protein (351aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1281200 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain UMEA 3162-1).;"
Putative ribosome biogenesis GTPase RsgA n=429 Tax=Escherichia RepID=RSGA_ECO27
ribosome-associated GTPase
L2_047_064G1_scaffold_550_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19405..19950
DNA (546bp) protein (182aa)
orn; oligoribonuclease (EC:3.1.-.-)
Oligoribonuclease {ECO:0000256|HAMAP-Rule:MF_00045}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00045};; TaxID=1444163 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-250-04_S3_C2.;"
Oligoribonuclease n=4 Tax=Escherichia RepID=F0JNX5_ESCFE
L2_047_064G1_scaffold_550_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20742..21881)
DNA (1140bp) protein (380aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
Epoxyqueuosine reductase n=6 Tax=Escherichia coli RepID=G1YKB9_ECOLX
yjeS; putative Fe-S electron transport protein
L2_047_064G1_scaffold_550_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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21895..23427
DNA (1533bp) protein (511aa)
YjeF family domain-containing protein n=8 Tax=Escherichia coli RepID=L4CMG9_ECOLX
Carbohydrate kinase superfamily {ECO:0000313|EMBL:EGI42520.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
hypothetical protein
L2_047_064G1_scaffold_550_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23399..23860
DNA (462bp) protein (154aa)
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE n=1100 Tax=Bacteria RepID=TSAE_ECO57
hypothetical protein
ADP-binding protein {ECO:0000313|EMBL:EZD90850.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L2_047_064G1_scaffold_550_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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23879..25216
DNA (1338bp) protein (446aa)
N-acetylmuramoyl-L-alanine amidase AmiB n=6 Tax=Escherichia coli RepID=H1BTK7_ECOLX
N-acetylmuramoyl-L-alanine amidase AmiB {ECO:0000313|EMBL:EHP67047.1}; TaxID=1127356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4_1_47FAA.;"
amiB; N-acetylmuramoyl-L-alanine amidase AmiB
L2_047_064G1_scaffold_550_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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25226..27073
DNA (1848bp) protein (616aa)
DNA mismatch repair protein MutL n=37 Tax=Escherichia coli RepID=MUTL_ECOSM
mutL; DNA mismatch repair protein
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149, ECO:0000256|SAAS:SAAS00058680}; TaxID=1281237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3304-1.;"
L2_047_064G1_scaffold_550_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27066..28016
DNA (951bp) protein (317aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1444215 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-110-08_S4_C1.;"
tRNA dimethylallyltransferase n=189 Tax=Escherichia RepID=MIAA_ECO7I
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase
L2_047_064G1_scaffold_550_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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28309..29589
DNA (1281bp) protein (427aa)
GTPase HflX n=962 Tax=Enterobacteriaceae RepID=C3SG37_ECOLX
putative GTPase HflX
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1444181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C3.;"
L2_047_064G1_scaffold_550_29
Trichuris trichiura, Trichuris, Trichocephalida, Dorylaimia, Nematoda, Metazoa

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29675..30934
DNA (1260bp) protein (420aa)
hflK; regulator of FtsH protease, subunit of HflK-HflC complex; regulator of FtsH protease and HflB, integral membrane ATP-dependent zinc metallopeptidase (EC:3.4.24.-)
HflK protein n=3 Tax=Escherichia coli RepID=M9DEW5_ECOLX
Band 7 and HflK N domain containing protein {ECO:0000313|EMBL:CDW60718.1}; TaxID=36087 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Dorylaimia; Trichocephalida; Trichuridae; Trichuris.;" source="Trichuris trichiura (Whipworm) (Trichocephalus trichiurus).;"
L2_047_064G1_scaffold_550_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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30937..31941
DNA (1005bp) protein (335aa)
Modulator of FtsH protease HflC n=1420 Tax=Bacteria RepID=HFLC_ECO57
hflC; modulator for HflB protease specific for phage lambda CII repressor
Modulator of FtsH protease HflC {ECO:0000256|PIRNR:PIRNR005651}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
Displaying items 1-30 of 54 in total

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