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L2_047_064G1_scaffold_563

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_064G1_scaffold_563_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(123..545)
DNA (423bp) protein (141aa)
Inner membrane protein yphA n=2 Tax=Escherichia coli RepID=L3Y6R1_ECOLX
yphA; hypothetical protein
Inner membrane protein yphA {ECO:0000313|EMBL:ETY42644.1}; TaxID=1328434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BWH 40.;"
L2_047_064G1_scaffold_563_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(642..1844)
DNA (1203bp) protein (401aa)
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component {ECO:0000256|HAMAP-Rule:MF_01651}; EC=1.18.1.3 {ECO:0000256|HAMAP-Rule:MF_01651};; Digoxigenin system ferredoxin--NAD(+) reductase component {ECO:0000256|HAMAP-Rule:MF_01651}; TaxID=1280961 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 6 (3-8296502).;"
hcaD; phenylpropionate dioxygenase ferredoxin reductase subunit (EC:1.18.1.3)
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+) reductase component n=2 Tax=Escherichia coli RepID=L4E6D9_ECOLX
L2_047_064G1_scaffold_563_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1854..2666)
DNA (813bp) protein (271aa)
3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01647}; EC=1.3.1.87 {ECO:0000256|HAMAP-Rule:MF_01647};; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01647}; 3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01647}; CI-dihydrodiol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01647}; Cis-3-(2-carboxyethenyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01647}; Cis-3-(2-carboxyethyl)-3,5-cyclohexadiene-1,2-diol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01647}; PP-dihydrodiol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01647}; TaxID=1444215 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-110-08_S4_C1.;"
3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase n=432 Tax=Enterobacteriaceae RepID=HCAB_ECO24
hcaB; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase
L2_047_064G1_scaffold_563_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2663..2983)
DNA (321bp) protein (107aa)
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit n=744 Tax=Enterobacteriaceae RepID=HCAC_ECO24
hcaC; 3-phenylpropionate/cinnamic acid dioxygenaseferredoxin subunit
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit {ECO:0000256|HAMAP-Rule:MF_01650}; Digoxigenin ferredoxin subunit {ECO:0000256|HAMAP-Rule:MF_01650}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L2_047_064G1_scaffold_563_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2983..3501)
DNA (519bp) protein (173aa)
3-phenylpropionate/cinnamic acid dioxygenase subunit beta {ECO:0000256|HAMAP-Rule:MF_01649}; EC=1.14.12.19 {ECO:0000256|HAMAP-Rule:MF_01649};; Digoxigenin subunit beta {ECO:0000256|HAMAP-Rule:MF_01649}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
3-phenylpropionate/cinnamic acid dioxygenase subunit beta n=2 Tax=Escherichia coli RepID=L3Y8T0_ECOLX
3-phenylpropionate dioxygenase subunit beta
L2_047_064G1_scaffold_563_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3498..4859)
DNA (1362bp) protein (454aa)
3-phenylpropionate/cinnamic acid dioxygenase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01648}; EC=1.14.12.19 {ECO:0000256|HAMAP-Rule:MF_01648};; Digoxigenin subunit alpha {ECO:0000256|HAMAP-Rule:MF_01648}; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D9.;"
3-phenylpropionate/cinnamic acid dioxygenase subunit alpha n=818 Tax=Bacteria RepID=HCAE_ECO57
Aromatic-ring-hydroxylating dioxygenase subunit alpha-like protein
L2_047_064G1_scaffold_563_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4995..5885
DNA (891bp) protein (297aa)
Hca operon transcriptional activator n=21 Tax=Escherichia coli RepID=D7ZIG3_ECOLX
Hca operon transcriptional activator {ECO:0000313|EMBL:ESK34866.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
hcaR; DNA-binding transcriptional regulator HcaR
L2_047_064G1_scaffold_563_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6045..7184
DNA (1140bp) protein (380aa)
phenyl proprionate permease family protein (EC:2.3.1.28)
MFS (Major facilitator superfamily) transporter n=6 Tax=Escherichia coli RepID=F4VX82_ECOLX
Putative 3-phenylpropionic acid transporter {ECO:0000313|EMBL:EMD09614.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli SEPT362.;"
L2_047_064G1_scaffold_563_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7176..8456)
DNA (1281bp) protein (427aa)
Stationary phase inducible protein n=1 Tax=Escherichia coli KTE9 RepID=L3Y693_ECOLX
csiE; stationary phase inducible protein CsiE
Stationary phase inducible protein CsiE {ECO:0000313|EMBL:EMD09613.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli SEPT362.;"
L2_047_064G1_scaffold_563_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8647..9501)
DNA (855bp) protein (285aa)
Peptidase n=4 Tax=Escherichia coli RepID=L4IQ77_ECOLX
Putative uncharacterized protein {ECO:0000313|EMBL:EGI40654.1}; TaxID=656444 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA280.;"
yfhR; peptidase
L2_047_064G1_scaffold_563_11
Shigella boydii, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9646..10449)
DNA (804bp) protein (268aa)
inositol-phosphate phosphatase (EC:3.1.3.25)
Inositol-1-monophosphatase {ECO:0000313|EMBL:EFW55459.1}; EC=3.1.3.25 {ECO:0000313|EMBL:EFW55459.1};; TaxID=932676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella boydii ATCC 9905.;"
Inositol-1-monophosphatase n=1345 Tax=Enterobacteriaceae RepID=SUHB_ECO57
L2_047_064G1_scaffold_563_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10568..11308
DNA (741bp) protein (247aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ n=1265 Tax=Enterobacteriaceae RepID=TRMJ_ECOK1
putative methyltransferase
L2_047_064G1_scaffold_563_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11578..12066
DNA (489bp) protein (163aa)
HTH-type transcriptional regulator IscR n=1222 Tax=Enterobacteriaceae RepID=ISCR_ECO24
iscR; DNA-binding transcriptional repressor
HTH-type transcriptional regulator IscR {ECO:0000256|HAMAP-Rule:MF_01176}; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
L2_047_064G1_scaffold_563_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12178..13392
DNA (1215bp) protein (405aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 (strain 2011C-3493).;"
Cysteine desulfurase n=1398 Tax=Bacteria RepID=ISCS_ECO24
L2_047_064G1_scaffold_563_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13420..13806
DNA (387bp) protein (129aa)
NifU-like protein n=1380 Tax=Enterobacteriaceae RepID=NIFU_ECO57
scaffold protein
NifU-like protein {ECO:0000313|EMBL:EMX31345.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP021561.2.;"
L2_047_064G1_scaffold_563_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13823..14146
DNA (324bp) protein (108aa)
Iron-binding protein IscA n=1441 Tax=Enterobacteriaceae RepID=ISCA_ECO27
iscA; FeS cluster assembly protein
Iron-binding protein IscA {ECO:0000256|HAMAP-Rule:MF_01429, ECO:0000256|SAAS:SAAS00037071}; Iron-sulfur cluster assembly protein {ECO:0000256|HAMAP-Rule:MF_01429}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L2_047_064G1_scaffold_563_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14242..14757
DNA (516bp) protein (172aa)
Co-chaperone protein HscB n=911 Tax=Enterobacteriaceae RepID=HSCB_ECO7I
co-chaperone Hsc20
Co-chaperone protein HscB {ECO:0000256|HAMAP-Rule:MF_00682}; Hsc20 {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=1444165 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C2.;"
L2_047_064G1_scaffold_563_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14774..16624
DNA (1851bp) protein (617aa)
Chaperone protein HscA n=4 Tax=Escherichia coli RepID=F4VX71_ECOLX
Chaperone protein HscA {ECO:0000256|HAMAP-Rule:MF_00679}; Hsc66 {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=1268998 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908573.;"
hscA; chaperone protein HscA
L2_047_064G1_scaffold_563_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16626..16961
DNA (336bp) protein (112aa)
2Fe-2S ferredoxin n=405 Tax=Escherichia RepID=E2QPZ1_ECOLX
fdx; [2Fe-2S] ferredoxin
Ferredoxin {ECO:0000313|EMBL:EGB72378.1}; TaxID=656449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TW10509.;"
L2_047_064G1_scaffold_563_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16973..17173
DNA (201bp) protein (67aa)
Protein IscX n=1144 Tax=Enterobacteriaceae RepID=ISCX_ECO57
yfhJ; Protein iscX
FeS assembly protein IscX {ECO:0000313|EMBL:EHW15749.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L2_047_064G1_scaffold_563_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17351..18634
DNA (1284bp) protein (428aa)
Peptidase B {ECO:0000256|HAMAP-Rule:MF_00504}; EC=3.4.11.23 {ECO:0000256|HAMAP-Rule:MF_00504};; Aminopeptidase B {ECO:0000256|HAMAP-Rule:MF_00504}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12A.;"
Peptidase B n=34 Tax=Escherichia coli RepID=PEPB_ECO24
pepB; aminopeptidase
L2_047_064G1_scaffold_563_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18753..19529
DNA (777bp) protein (259aa)
Enhanced serine sensitivity protein SseB n=120 Tax=Escherichia RepID=A1AE60_ECOK1
sseB; enhanced serine sensitivity protein SseB
Protein sseB {ECO:0000313|EMBL:ELE54556.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE75.;"
Displaying 22 items

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