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L2_047_064G1_scaffold_678

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_064G1_scaffold_678_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18..1217
DNA (1200bp) protein (400aa)
Elongation factor Tu n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1N2_9CLOT
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
tuf; elongation factor Tu
L2_047_064G1_scaffold_678_2
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1287..1436
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=2 Tax=Clostridium RepID=R9CL88_9CLOT
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
LSU ribosomal protein L33P
L2_047_064G1_scaffold_678_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1488..1721
DNA (234bp) protein (78aa)
Protein translocase subunit SecE n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1Q1_9CLOT
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
secE; preprotein translocase subunit SecE
L2_047_064G1_scaffold_678_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1755..2276
DNA (522bp) protein (174aa)
Transcription termination/antitermination factor NusG n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1M8_9CLOT
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
nusG; transcription termination/antitermination factor NusG
L2_047_064G1_scaffold_678_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2346..2771
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H646_9CLOT
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rplK; ribosomal protein L11
L2_047_064G1_scaffold_678_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2824..3513
DNA (690bp) protein (230aa)
50S ribosomal protein L1 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HE96_9CLOT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rplA; 50S ribosomal protein L1
L2_047_064G1_scaffold_678_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3722..4225
DNA (504bp) protein (168aa)
50S ribosomal protein L10 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HBM4_9CLOT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ribosomal L10 family protein
L2_047_064G1_scaffold_678_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4257..4625
DNA (369bp) protein (123aa)
50S ribosomal protein L7/L12 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H231_9CLOT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rplL; 50S ribosomal protein L7/L12
L2_047_064G1_scaffold_678_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4979..8686
DNA (3708bp) protein (1236aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rpoB; DNA-directed RNA polymerase, beta subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1M9_9CLOT
L2_047_064G1_scaffold_678_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8708..12241
DNA (3534bp) protein (1178aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rpoC; DNA-directed RNA polymerase, beta' subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H649_9CLOT
L2_047_064G1_scaffold_678_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12368..12634
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HE98_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96414.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative ribosomal protein L7Ae-like
L2_047_064G1_scaffold_678_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12700..13080
DNA (381bp) protein (127aa)
30S ribosomal protein S12 n=2 Tax=Clostridium RepID=R9CL79_9CLOT
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rpsL; 30S ribosomal protein S12
L2_047_064G1_scaffold_678_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13234..13704
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H232_9CLOT
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rpsG; 30S ribosomal protein S7
L2_047_064G1_scaffold_678_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13780..15843
DNA (2064bp) protein (688aa)
Elongation factor G n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H1N0_9CLOT
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
fusA; elongation factor G
L2_047_064G1_scaffold_678_15
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16030..16110
DNA (81bp) protein (27aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=2 Tax=Clostridium RepID=R6LMN0_9CLOT
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; Flags: Fragment;; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
Displaying 15 items

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