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L2_047_362G1_scaffold_11

Search features with annotation key words

Displaying items 1-30 of 251 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_11_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..140
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAE3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47321.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
PhoH family protein
L2_047_362G1_scaffold_11_2
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

185..691
DNA (507bp) protein (169aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Endoribonuclease YbeY n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVU5_9FIRM
hypothetical protein
L2_047_362G1_scaffold_11_3
unknown

Not on your lists

688..849
DNA (162bp) protein (54aa)

This feature has no annotations

L2_047_362G1_scaffold_11_4
unknown

Not on your lists

1024..1272
DNA (249bp) protein (83aa)

This feature has no annotations

L2_047_362G1_scaffold_11_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1438..2334
DNA (897bp) protein (299aa)
GTPase Era n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAE5_9FIRM
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
era; GTP-binding protein Era
L2_047_362G1_scaffold_11_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2856..3623
DNA (768bp) protein (256aa)
DNA repair protein RecO n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAE7_9FIRM
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
recO; DNA repair protein RecO
L2_047_362G1_scaffold_11_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3702..5510)
DNA (1809bp) protein (603aa)
pepF; oligoendopeptidase F (EC:3.4.24.-)
Oligoendopeptidase F n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAE8_9FIRM
Oligoendopeptidase F {ECO:0000313|EMBL:EGJ47326.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_362G1_scaffold_11_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5764..6819
DNA (1056bp) protein (352aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAE9_9FIRM
L2_047_362G1_scaffold_11_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6816..7403
DNA (588bp) protein (196aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAF0_9FIRM
hisB; imidazoleglycerol-phosphate dehydratase
L2_047_362G1_scaffold_11_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7416..8495
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47329.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
tRNA synthetase class II (G H P and S)
L2_047_362G1_scaffold_11_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8492..9109
DNA (618bp) protein (206aa)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00008790}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_01018};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_01018};; EC=2.4.2.17 {ECO:0000256|HAMAP-Rule:MF_01018, ECO:0000256|SAAS:SAAS00046302};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ATP phosphoribosyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAF2_9FIRM
ATP phosphoribosyltransferase
L2_047_362G1_scaffold_11_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9120..10409
DNA (1290bp) protein (430aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hisD; histidinol dehydrogenase (EC:1.1.1.23)
Histidinol dehydrogenase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAF3_9FIRM
L2_047_362G1_scaffold_11_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10406..11026
DNA (621bp) protein (207aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
imidazole glycerol phosphate synthase subunit hisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAF4_9FIRM
L2_047_362G1_scaffold_11_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11033..11746
DNA (714bp) protein (238aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=2 Tax=Clostridiales RepID=G9YVS3_9FIRM
phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
L2_047_362G1_scaffold_11_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11750..12508
DNA (759bp) protein (253aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
imidazole glycerol phosphate synthase subunit hisF (EC:4.1.3.-)
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAF6_9FIRM
L2_047_362G1_scaffold_11_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12508..12843
DNA (336bp) protein (112aa)
Phosphoribosyl-AMP cyclohydrolase {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00006950}; Short=PRA-CH {ECO:0000256|HAMAP-Rule:MF_01021};; EC=3.5.4.19 {ECO:0000256|HAMAP-Rule:MF_01021, ECO:0000256|SAAS:SAAS00103216};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAF7_9FIRM
phosphoribosyl-ATP diphosphatase
L2_047_362G1_scaffold_11_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12845..13177
DNA (333bp) protein (111aa)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase (EC:3.5.4.19 3.6.1.31)
Phosphoribosyl-ATP pyrophosphatase n=2 Tax=Clostridiales RepID=G9YVS6_9FIRM
L2_047_362G1_scaffold_11_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13299..14129
DNA (831bp) protein (277aa)
histidinol phosphate phosphatase HisJ family (EC:3.1.3.15)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47337.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_362G1_scaffold_11_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14129..14569
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47338.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative hydrolase
L2_047_362G1_scaffold_11_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14690..15823
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47341.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_047_362G1_scaffold_11_21
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16087..17442)
DNA (1356bp) protein (452aa)
RNA polymerase sigma factor SigA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9B0_9FIRM
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
sigA; RNA polymerase sigma factor SigA
L2_047_362G1_scaffold_11_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17439..19199)
DNA (1761bp) protein (587aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
dnaG; DNA primase (EC:2.7.7.-)
DNA primase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCC2_9FIRM
L2_047_362G1_scaffold_11_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19461..20465)
DNA (1005bp) protein (335aa)
dGTPase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCC1_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
deoxyguanosinetriphosphate triphosphohydrolase
L2_047_362G1_scaffold_11_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20572..21963)
DNA (1392bp) protein (464aa)
Aldehyde dehydrogenase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCC0_9FIRM
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Aldehyde Dehydrogenase
L2_047_362G1_scaffold_11_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21960..23147)
DNA (1188bp) protein (396aa)
Rod shape determining protein RodA n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP6_9FIRM
Rod shape determining protein RodA {ECO:0000313|EMBL:EGJ47774.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative cell division protein FtsW
L2_047_362G1_scaffold_11_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23273..23701
DNA (429bp) protein (143aa)
YjeE family ATPase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP7_9FIRM
YjeE family ATPase {ECO:0000313|EMBL:EGJ47775.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative hydrolase
L2_047_362G1_scaffold_11_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23766..24491
DNA (726bp) protein (242aa)
Universal bacterial protein YeaZ n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP8_9FIRM
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EGJ47776.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
peptidase M22 family protein
L2_047_362G1_scaffold_11_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24506..25147
DNA (642bp) protein (214aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_01218}; UPRTase {ECO:0000256|HAMAP-Rule:MF_01218}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Uracil phosphoribosyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBP9_9FIRM
L2_047_362G1_scaffold_11_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25271..25771
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X8Y4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47876.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_047_362G1_scaffold_11_30
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26026..27228
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8VRT9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOQ35455.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
Na+/H+-dicarboxylate symporters
Displaying items 1-30 of 251 in total

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