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L2_047_362G1_scaffold_124

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_124_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..796)
DNA (795bp) protein (265aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
glycerol kinase (EC:2.7.1.30)
Glycerol kinase n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GR84_CLOSY
L2_047_362G1_scaffold_124_2
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(869..1438)
DNA (570bp) protein (190aa)
Uncharacterized protein n=2 Tax=Dorea sp. 5-2 RepID=R9NEI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS81558.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Glycerol-3-phosphate responsive antiterminator (mRNA-binding)
L2_047_362G1_scaffold_124_3
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1686..2195)
DNA (510bp) protein (170aa)
Acetyltransferase (GNAT) family n=1 Tax=Dorea sp. CAG:317 RepID=R6WEQ2_9FIRM
Acetyltransferase (GNAT) family {ECO:0000313|EMBL:CDD07900.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Acetyltransferase (GNAT) family.
L2_047_362G1_scaffold_124_4
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2231..2407)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WLT3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07899.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
hypothetical protein
L2_047_362G1_scaffold_124_5
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2451..2897)
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NHZ8_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35907.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_047_362G1_scaffold_124_6
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2902..3723)
DNA (822bp) protein (274aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Dorea longicatena CAG:42 RepID=R7G0G1_9FIRM
L2_047_362G1_scaffold_124_7
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3907..4884)
DNA (978bp) protein (326aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:0000256|HAMAP-Rule:MF_00339};; Phosphohexokinase {ECO:0000256|HAMAP-Rule:MF_00339}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase n=2 Tax=Clostridiales RepID=B0NI00_CLOSV
L2_047_362G1_scaffold_124_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4948..8424)
DNA (3477bp) protein (1159aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
DNA polymerase III catalytic subunit, DnaE type (EC:2.7.7.7)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMR8_9FIRM
L2_047_362G1_scaffold_124_9
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8568..8801)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AV53_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ28364.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L2_047_362G1_scaffold_124_10
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8841..9680)
DNA (840bp) protein (280aa)
S1 RNA binding domain protein n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BG54_9FIRM
S1 RNA binding domain protein {ECO:0000313|EMBL:EDM63265.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
hypothetical protein
L2_047_362G1_scaffold_124_11
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9776..10498)
DNA (723bp) protein (241aa)
Acyl-ACP thioesterase (EC:3.1.2.14)
Acyl-ACP thioesterase n=2 Tax=Clostridiales RepID=B0NI05_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35913.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_047_362G1_scaffold_124_12
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10485..11669)
DNA (1185bp) protein (395aa)
Cation diffusion facilitator family transporter n=2 Tax=Clostridiales RepID=B0NI06_CLOSV
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EDS05754.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
cation diffusion facilitator family transporter
L2_047_362G1_scaffold_124_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11666..12379)
DNA (714bp) protein (238aa)
Stage II sporulation protein R n=2 Tax=Clostridiales RepID=B0NI07_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN35915.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
stage II sporulation protein R
L2_047_362G1_scaffold_124_14
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12457..13134)
DNA (678bp) protein (226aa)
FCD domain protein n=2 Tax=Dorea RepID=A6BG57_9FIRM
FCD domain protein {ECO:0000313|EMBL:EDM63268.1}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
transcriptional regulator, GntR family
L2_047_362G1_scaffold_124_15
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13138..14013)
DNA (876bp) protein (292aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
4-diphosphocytidyl-2C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=2 Tax=Dorea RepID=A6BG58_9FIRM
L2_047_362G1_scaffold_124_16
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14047..15606)
DNA (1560bp) protein (520aa)
LysM domain protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NI10_CLOSV
LysM domain protein {ECO:0000313|EMBL:EDS05758.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
LysM domain.
L2_047_362G1_scaffold_124_17
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15622..16068)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5W3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG72497.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
hypothetical protein
L2_047_362G1_scaffold_124_18
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16169..16966)
DNA (798bp) protein (266aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=3 Tax=Clostridiales RepID=B0NHR8_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN38783.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_047_362G1_scaffold_124_19
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17165..17899
DNA (735bp) protein (245aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
1-acyl-sn-glycerol-3-phosphate acyltransferases (EC:2.3.1.51)
Acyltransferase n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NI23_CLOSV
L2_047_362G1_scaffold_124_20
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18025..19479
DNA (1455bp) protein (485aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
putative nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5W0_9CLOT
L2_047_362G1_scaffold_124_21
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19495..20598
DNA (1104bp) protein (368aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Dorea sp. CAG:105 RepID=R5D4C6_9FIRM
L2_047_362G1_scaffold_124_22
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20595..21965
DNA (1371bp) protein (457aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KMJ8_9FIRM
L2_047_362G1_scaffold_124_23
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21988..22803
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WT11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07106.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
HAD-superfamily hydrolase, subfamily IIB
L2_047_362G1_scaffold_124_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22810..23802
DNA (993bp) protein (331aa)
CAAX amino terminal protease family protein n=5 Tax=Clostridiales RepID=A5KQR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26138.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
metal-dependent membrane protease
L2_047_362G1_scaffold_124_25
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23831..24757
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G220_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR48319.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
Lysophospholipase
L2_047_362G1_scaffold_124_26
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24778..26142)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WRW2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD06701.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
putative efflux protein, MATE family
L2_047_362G1_scaffold_124_27
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26308..31836)
DNA (5529bp) protein (1843aa)
Putative uncharacterized protein n=1 Tax=Bacteroides dorei DSM 17855 RepID=B6VXD6_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKA69366.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
L2_047_362G1_scaffold_124_28
Anaerostipes sp. CAG:276, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31854..32120
DNA (267bp) protein (89aa)
LPXTG-motif cell wall anchor domain protein n=2 Tax=Anaerostipes RepID=R6QAV5_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:CDC33808.1}; TaxID=1262699 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes; environmental samples.;" source="Anaerostipes sp. CAG:276.;"
L2_047_362G1_scaffold_124_29
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32451..33716
DNA (1266bp) protein (422aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MCV6_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EDR97776.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
hypothetical protein predicted by Glimmer/Critica
L2_047_362G1_scaffold_124_30
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33786..34907)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6T8R0_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO06224.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying items 1-30 of 94 in total

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