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L2_047_362G1_scaffold_129

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_129_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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169..465
DNA (297bp) protein (99aa)
Predicted RNA-binding protein containing KH domain, possibly ribosomal protein n=2 Tax=Faecalibacterium prausnitzii RepID=D4K317_9FIRM
Predicted RNA-binding protein containing KH domain, possibly ribosomal protein
Predicted RNA-binding protein containing KH domain, possibly ribosomal protein {ECO:0000313|EMBL:CBK97910.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_129_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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465..1142
DNA (678bp) protein (226aa)
nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244, ECO:0000313|EMBL:CBK97911.1};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K318_9FIRM
L2_047_362G1_scaffold_129_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1096..1671
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K319_9FIRM
conserved hypothetical protein TIGR00488
Uncharacterized protein {ECO:0000313|EMBL:CBK97912.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_129_4
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1778..3196
DNA (1419bp) protein (473aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PY73_9FIRM
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:CDC29388.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
cell envelope-related function transcriptional attenuator common domain
L2_047_362G1_scaffold_129_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3212..3592
DNA (381bp) protein (127aa)
Ribosomal silencing factor RsfS n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K320_9FIRM
iojap-related protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_129_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3761..6310
DNA (2550bp) protein (850aa)
leucyl-tRNA synthetase, eubacterial and mitochondrial family (EC:6.1.1.4)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:CBK97914.1};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Leucine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K321_9FIRM
L2_047_362G1_scaffold_129_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6663..6839
DNA (177bp) protein (59aa)
30S ribosomal protein S21 n=6 Tax=Faecalibacterium RepID=D4K322_9FIRM
SSU ribosomal protein S21P
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_047_362G1_scaffold_129_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6950..7453
DNA (504bp) protein (168aa)
HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K323_9FIRM
HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
HAD superfamily (Subfamily IIIA) phosphatase, TIGR01668 {ECO:0000313|EMBL:CBK97916.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_129_9
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7450..8313
DNA (864bp) protein (288aa)
AP endonuclease family 2 n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PY69_9FIRM
AP endonuclease family 2 {ECO:0000313|EMBL:CDC29383.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
xylose isomerase domain-containing protein TIM barrel
L2_047_362G1_scaffold_129_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8495..9052
DNA (558bp) protein (186aa)
Elongation factor P n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K325_9FIRM
translation elongation factor P (EF-P)
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_129_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9144..9731
DNA (588bp) protein (196aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K326_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97919.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_129_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9829..11643)
DNA (1815bp) protein (605aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123, ECO:0000313|EMBL:CBK97920.1};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
arginyl-tRNA synthetase (EC:6.1.1.19)
Arginine--tRNA ligase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K327_9FIRM
L2_047_362G1_scaffold_129_13
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11716..12180)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q0N1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29365.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_047_362G1_scaffold_129_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12196..13020)
DNA (825bp) protein (275aa)
glutamate racemase (EC:5.1.1.3)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Glutamate racemase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K328_9FIRM
L2_047_362G1_scaffold_129_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13013..14113)
DNA (1101bp) protein (367aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
D-alanine--D-alanine ligase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K329_9FIRM
L2_047_362G1_scaffold_129_16
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14417..14566
DNA (150bp) protein (50aa)
50S ribosomal protein L33 n=6 Tax=Faecalibacterium RepID=D4K330_9FIRM
LSU ribosomal protein L33P
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
L2_047_362G1_scaffold_129_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14584..14835
DNA (252bp) protein (84aa)
Protein translocase subunit SecE n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K331_9FIRM
preprotein translocase, SecE subunit, bacterial
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_129_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14864..15394
DNA (531bp) protein (177aa)
Transcription termination/antitermination protein NusG n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K332_9FIRM
transcription antitermination protein nusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_129_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15529..15954
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K333_9FIRM
LSU ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_129_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16012..16704
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K334_9FIRM
LSU ribosomal protein L1P
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_129_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16951..17466
DNA (516bp) protein (172aa)
50S ribosomal protein L10 n=2 Tax=root RepID=D4K335_9FIRM
LSU ribosomal protein L10P
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_129_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17539..17913
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K336_9FIRM
LSU ribosomal protein L12P
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_129_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18175..19836
DNA (1662bp) protein (554aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543, ECO:0000313|EMBL:CBK97930.1};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K337_9FIRM
L2_047_362G1_scaffold_129_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20091..21101
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K338_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK97931.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_129_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21161..22171)
DNA (1011bp) protein (337aa)
SpoIID/LytB domain n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K339_9FIRM
SpoIID/LytB domain
SpoIID/LytB domain {ECO:0000313|EMBL:CBK97932.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_129_26
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22336..23118
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QE62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC29161.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L2_047_362G1_scaffold_129_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23315..24346
DNA (1032bp) protein (344aa)
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K340_9FIRM
L2_047_362G1_scaffold_129_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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24550..25806
DNA (1257bp) protein (419aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CBK97934.1}; EC=1.1.1.22 {ECO:0000313|EMBL:CBK97934.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Nucleotide sugar dehydrogenase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K341_9FIRM
L2_047_362G1_scaffold_129_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26048..27256
DNA (1209bp) protein (403aa)
3-phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Phosphoglycerate kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K342_9FIRM
L2_047_362G1_scaffold_129_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27340..28110
DNA (771bp) protein (257aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Triosephosphate isomerase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K343_9FIRM
Displaying items 1-30 of 91 in total

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