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L2_047_362G1_scaffold_169

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_169_1
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..273
DNA (273bp) protein (91aa)
Flavodoxins n=3 Tax=Clostridiales RepID=D4MZ90_9FIRM
Flavodoxins
Flavodoxin {ECO:0000313|EMBL:EDS23066.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L2_047_362G1_scaffold_169_2
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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302..1069
DNA (768bp) protein (256aa)
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit n=3 Tax=Clostridiales RepID=D4MZ91_9FIRM
Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit
Cupin domain protein {ECO:0000313|EMBL:EDS23067.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L2_047_362G1_scaffold_169_3
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1116..1322
DNA (207bp) protein (69aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0NX63_9CLOT
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EDS23068.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Aldo/keto reductases, related to diketogulonate reductase
L2_047_362G1_scaffold_169_4
unknown

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1735..2202
DNA (468bp) protein (156aa)
Protein-tyrosine-phosphatase (EC:3.1.3.48)
Protein-tyrosine-phosphatase {ECO:0000313|EMBL:CBL37946.1}; EC=3.1.3.48 {ECO:0000313|EMBL:CBL37946.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Protein-tyrosine-phosphatase n=2 Tax=Clostridiales RepID=D4MZA1_9FIRM
L2_047_362G1_scaffold_169_5
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2212..2961)
DNA (750bp) protein (250aa)
Putative DNA metabolism protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PV08_9FIRM
Putative DNA metabolism protein {ECO:0000313|EMBL:EKY19569.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L2_047_362G1_scaffold_169_6
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2994..4487)
DNA (1494bp) protein (498aa)
Putative DNA modification/repair radical SAM protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PVR4_9FIRM
Putative DNA modification/repair radical SAM protein {ECO:0000313|EMBL:EKY19570.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Predicted DNA-binding protein with the Helix-hairpin-helix motif
L2_047_362G1_scaffold_169_7
unknown

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comp(4631..4981)
DNA (351bp) protein (117aa)
PTS system, fructose-specific, IIB component (EC:2.7.1.69)
PTS system, fructose-specific, IIB component {ECO:0000313|EMBL:CBL37949.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CBL37949.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
PTS system, fructose-specific, IIB component n=3 Tax=Clostridiales RepID=D4MZA4_9FIRM
L2_047_362G1_scaffold_169_8
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5193..6296
DNA (1104bp) protein (368aa)
GntR family Bacterial regulatory protein n=2 Tax=Lachnospiraceae RepID=E5VGN6_9FIRM
GntR family Bacterial regulatory protein {ECO:0000313|EMBL:EFV18060.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
transcriptional regulator, GntR family
L2_047_362G1_scaffold_169_9
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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6319..7815
DNA (1497bp) protein (499aa)
L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L-arabinose isomerase n=3 Tax=Clostridiales RepID=D4MZA6_9FIRM
L2_047_362G1_scaffold_169_10
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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7833..9425
DNA (1593bp) protein (531aa)
Carbohydrate kinase, FGGY family protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PV12_9FIRM
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EKY19574.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Sugar (pentulose and hexulose) kinases
L2_047_362G1_scaffold_169_11
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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9441..10133
DNA (693bp) protein (231aa)
L-ribulose 5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose 5-phosphate 4-epimerase n=2 Tax=Lachnospiraceae RepID=R5Z879_9FIRM
L-ribulose 5-phosphate 4-epimerase {ECO:0000313|EMBL:CDA32939.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_047_362G1_scaffold_169_12
unknown

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10187..11203
DNA (1017bp) protein (339aa)
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096, ECO:0000313|EMBL:CBL37954.1}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096, ECO:0000313|EMBL:CBL37954.1};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Aldose 1-epimerase n=2 Tax=Clostridiales RepID=D4MZA9_9FIRM
L2_047_362G1_scaffold_169_13
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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11346..12965
DNA (1620bp) protein (540aa)
Response regulator receiver domain protein n=2 Tax=Lachnospiraceae RepID=R5ZV59_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA32937.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain
L2_047_362G1_scaffold_169_14
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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12965..14431
DNA (1467bp) protein (489aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Histidine kinase./HAMP domain. (EC:2.7.13.3)
Histidine kinase-DNA gyrase B-and HSP90-like ATPase./Histidine kinase./HAMP domain n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZFP0_9FIRM
L2_047_362G1_scaffold_169_15
unknown

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14619..15623
DNA (1005bp) protein (335aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) n=3 Tax=Clostridiales RepID=D4MZB3_9FIRM
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBL37958.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_047_362G1_scaffold_169_16
unknown

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15802..17319
DNA (1518bp) protein (506aa)
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) n=2 Tax=Clostridiales RepID=D4MZB4_9FIRM
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBL37959.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_047_362G1_scaffold_169_17
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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17322..18362
DNA (1041bp) protein (347aa)
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) n=5 Tax=Clostridiales RepID=D4MZB5_9FIRM
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
Branched-chain amino acid transport system/permease component {ECO:0000313|EMBL:CDA32933.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_047_362G1_scaffold_169_18
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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18362..19408
DNA (1047bp) protein (349aa)
Branched-chain amino acid transport system/permease component n=2 Tax=Lachnospiraceae RepID=E5VGM5_9FIRM
Branched-chain amino acid transport system/permease component {ECO:0000313|EMBL:EFV18049.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
L2_047_362G1_scaffold_169_19
unknown

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19449..20933
DNA (1485bp) protein (495aa)
L-fucose isomerase and related proteins n=3 Tax=Clostridiales RepID=D4MZB7_9FIRM
L-fucose isomerase and related proteins
L-fucose isomerase and related proteins {ECO:0000313|EMBL:CBL37962.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_047_362G1_scaffold_169_20
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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comp(21041..21886)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C4F6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD73034.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
AraC family transcriptional regulator
L2_047_362G1_scaffold_169_21
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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22059..23417
DNA (1359bp) protein (453aa)
hypothetical protein n=1 Tax=Bacillus endophyticus RepID=UPI0003118A37
sugar (Glycoside-Pentoside-Hexuronide) transporter
Glycoside/pentoside/hexuronide transporter {ECO:0000313|EMBL:CCX75622.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
L2_047_362G1_scaffold_169_22
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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23444..25672
DNA (2229bp) protein (743aa)
Alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase {ECO:0000313|EMBL:CBL25056.1}; EC=3.2.1.22 {ECO:0000313|EMBL:CBL25056.1};; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
hypothetical protein n=1 Tax=Bacillus endophyticus RepID=UPI0002E0F812
L2_047_362G1_scaffold_169_23
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25672..26301
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KL99_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB62902.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Predicted membrane protein
L2_047_362G1_scaffold_169_24
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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26326..26784
DNA (459bp) protein (153aa)
PTS system, beta-glucoside-specific, IIABC component n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PVP0_9FIRM
PTS system, beta-glucoside-specific, IIABC component {ECO:0000313|EMBL:EKY19540.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.5)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.5)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.5)
L2_047_362G1_scaffold_169_25
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26895..27926)
DNA (1032bp) protein (344aa)
Transcriptional regulator, LacI family n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EUI7_9FIRM
Transcriptional regulator LacI family {ECO:0000313|EMBL:CDB18167.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
transcriptional regulator, LacI family
L2_047_362G1_scaffold_169_26
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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28177..29460
DNA (1284bp) protein (428aa)
Galactokinase (EC:2.7.1.6)
Galactokinase n=4 Tax=Clostridiales RepID=D4MZC0_9FIRM
Galactokinase {ECO:0000313|EMBL:CDA32928.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_047_362G1_scaffold_169_27
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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29462..30481
DNA (1020bp) protein (340aa)
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
Aldose 1-epimerase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1PW23_9FIRM
L2_047_362G1_scaffold_169_28
unknown

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30483..31979
DNA (1497bp) protein (499aa)
UTP-hexose-1-phosphate uridylyltransferase (EC:2.7.7.10)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Galactose-1-phosphate uridylyltransferase n=2 Tax=Clostridiales RepID=D4MZC2_9FIRM
L2_047_362G1_scaffold_169_29
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32010..33020
DNA (1011bp) protein (337aa)
UDP-galactose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase n=2 Tax=Lachnospiraceae RepID=E5VGL8_9FIRM
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EFV18042.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L2_047_362G1_scaffold_169_30
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33183..34910
DNA (1728bp) protein (576aa)
ABC transporter n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VGL7_9FIRM
ABC transporter {ECO:0000313|EMBL:EFV18041.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
ABC-type multidrug transport system, ATPase and permease components
Displaying items 1-30 of 70 in total

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