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L2_047_362G1_scaffold_185

Search features with annotation key words

Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_185_1
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..169
DNA (168bp) protein (56aa)
ABC transporter, permease protein n=2 Tax=Oscillibacter RepID=U2PV83_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:ERK59282.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
ABC transporter permease
L2_047_362G1_scaffold_185_2
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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176..1168
DNA (993bp) protein (331aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2QDC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK59283.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hydrolase
L2_047_362G1_scaffold_185_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1358..2542
DNA (1185bp) protein (395aa)
ABC transporter, ATP-binding protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PB42_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS11372.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
phycoerythrin, alpha/beta chain
L2_047_362G1_scaffold_185_4
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2648..3937)
DNA (1290bp) protein (430aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHU7_9FIRM
integral membrane sensor signal transduction histidine kinase
L2_047_362G1_scaffold_185_5
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3930..4610)
DNA (681bp) protein (227aa)
Response regulator receiver domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHU6_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDS09064.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
transcriptional regulator
L2_047_362G1_scaffold_185_6
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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4786..7020
DNA (2235bp) protein (745aa)
Uncharacterized protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PHU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDS09063.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
ABC transporter substrate-binding protein
L2_047_362G1_scaffold_185_7
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7187..8470
DNA (1284bp) protein (428aa)
galactokinase (EC:2.7.1.6)
GHMP kinase, N-terminal domain protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0P930_9FIRM
GHMP kinase, N-terminal domain protein {ECO:0000313|EMBL:EDS12056.1}; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus colihominis DSM 17241.;"
L2_047_362G1_scaffold_185_8
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8467..9504
DNA (1038bp) protein (346aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=2 Tax=Clostridiales RepID=R5TG34_9FIRM
L2_047_362G1_scaffold_185_9
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9525..11105
DNA (1581bp) protein (527aa)
Response regulator receiver domain protein n=4 Tax=Clostridium RepID=E9SMT3_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA94582.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
AraC family transcriptional regulator
L2_047_362G1_scaffold_185_10
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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11171..12970
DNA (1800bp) protein (600aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase./Cache domain./Histidine kinase./HAMP domain. (EC:2.7.13.3)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GZK8_9FIRM
L2_047_362G1_scaffold_185_11
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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12970..13884
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HYN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB30917.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family
L2_047_362G1_scaffold_185_12
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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13900..14901
DNA (1002bp) protein (334aa)
Monosaccharide ABC transporter substrate-binding protein CUT2 family (TC 3.A.1.2.-) n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HBF9_9FIRM
Monosaccharide ABC transporter substrate-binding protein CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CDB30916.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
LacI family transcriptional regulator
L2_047_362G1_scaffold_185_13
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15090..16265
DNA (1176bp) protein (392aa)
Uncharacterized protein n=2 Tax=Anaerotruncus sp. G3(2012) RepID=R9M451_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65618.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
periplasmic binding protein/LacI transcriptional regulator
L2_047_362G1_scaffold_185_14
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16450..17949
DNA (1500bp) protein (500aa)
Galactose/methyl galactoside import ATP-binding protein MglA {ECO:0000256|HAMAP-Rule:MF_01717}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01717};; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
Methyl-galactoside transport system ATP-binding protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M3H1_9FIRM
ABC transporter
L2_047_362G1_scaffold_185_15
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17965..19026
DNA (1062bp) protein (354aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M3Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS65620.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
L2_047_362G1_scaffold_185_16
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19105..20409
DNA (1305bp) protein (435aa)
Hexokinase (EC:2.7.1.1)
Hexokinase n=2 Tax=Clostridium RepID=A7VQQ7_9CLOT
Hexokinase {ECO:0000313|EMBL:CDC04004.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
L2_047_362G1_scaffold_185_17
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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20461..22128
DNA (1668bp) protein (556aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
fhs; formate--tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPE9_9FIRM
L2_047_362G1_scaffold_185_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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22091..23230
DNA (1140bp) protein (380aa)
Citrate transporter n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ56_9FIRM
Citrate transporter {ECO:0000313|EMBL:EDM98705.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Na+/H+ antiporter NhaD-like permease
L2_047_362G1_scaffold_185_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23371..24849)
DNA (1479bp) protein (493aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EDM98832.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EDM98832.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZI3_9FIRM
L2_047_362G1_scaffold_185_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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25115..27568
DNA (2454bp) protein (818aa)
Ferrous iron transport protein B n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1S4_9FIRM
Ferrous iron transport protein B {ECO:0000313|EMBL:EDM97966.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ferrous iron transporter FeoB
L2_047_362G1_scaffold_185_21
unknown

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27679..27963
DNA (285bp) protein (95aa)

This feature has no annotations

L2_047_362G1_scaffold_185_22
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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27917..28537
DNA (621bp) protein (207aa)
Thiamine diphosphokinase {ECO:0000313|EMBL:EDM97888.1}; EC=2.7.6.2 {ECO:0000313|EMBL:EDM97888.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
thiN; putative thiamine pyrophosphokinase (EC:2.7.6.2)
Thiamine diphosphokinase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1J6_9FIRM
L2_047_362G1_scaffold_185_23
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28608..30092)
DNA (1485bp) protein (495aa)
aldehyde dehydrogenase (acceptor) (EC:1.2.99.3)
Aldehyde dehydrogenase n=1 Tax=Clostridium sp. D5 RepID=F0Z5H0_9CLOT
Aldehyde dehydrogenase {ECO:0000313|EMBL:EGB90653.1}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
L2_047_362G1_scaffold_185_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30394..31062)
DNA (669bp) protein (223aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CHX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30178.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_047_362G1_scaffold_185_25
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31373..32554
DNA (1182bp) protein (394aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CHX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30176.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
bifunctional beta-cystathionase/maltose regulon repressor
L2_047_362G1_scaffold_185_26
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32625..33959)
DNA (1335bp) protein (445aa)
MATE efflux family protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9MF65_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EOS66502.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
putative drug/sodium antiporter, MATE family
L2_047_362G1_scaffold_185_27
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34036..34842
DNA (807bp) protein (269aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CKC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO25431.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
regulatory protein MerR
L2_047_362G1_scaffold_185_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34950..36371)
DNA (1422bp) protein (474aa)
Amino acid permease n=2 Tax=Clostridiales RepID=U2APL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56766.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
amino acid permease-associated protein
L2_047_362G1_scaffold_185_29
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(36716..37147)
DNA (432bp) protein (144aa)
Acyl-CoA hydrolase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWL4_CLOSD
Acyl-CoA hydrolase
Tax=BJP_IG2103_Clostridiales_50_15
L2_047_362G1_scaffold_185_30
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37836..39227
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NW28_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM99685.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
Displaying items 1-30 of 61 in total

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