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L2_047_362G1_scaffold_196

Search features with annotation key words

Displaying items 1-30 of 71 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_196_1
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(256..621)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0Q6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73790.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L2_047_362G1_scaffold_196_2
unknown

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comp(1134..1286)
DNA (153bp) protein (51aa)

This feature has no annotations

L2_047_362G1_scaffold_196_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1652..2986)
DNA (1335bp) protein (445aa)
MATE efflux family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NVR1_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EDM99804.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
mate efflux family protein
L2_047_362G1_scaffold_196_4
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3173..4396)
DNA (1224bp) protein (408aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
lysC; Aspartokinase (EC:2.7.2.4)
Aspartokinase n=3 Tax=Clostridiales RepID=G9YN00_9FIRM
L2_047_362G1_scaffold_196_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4498..5709)
DNA (1212bp) protein (404aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Homoserine dehydrogenase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P130_9FIRM
homoserine dehydrogenase
L2_047_362G1_scaffold_196_6
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5741..6181)
DNA (441bp) protein (147aa)
ACT domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P131_9FIRM
ACT domain protein {ECO:0000313|EMBL:EDM98052.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_047_362G1_scaffold_196_7
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6383..7456
DNA (1074bp) protein (358aa)
Sporulation integral membrane protein YtvI n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BZM9_9CLOT
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:KGF55683.1}; Flags: Fragment;; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
putative membrane protein
L2_047_362G1_scaffold_196_8
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7598..9019
DNA (1422bp) protein (474aa)
Potassium transporter peripheral membrane component n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 PF2_9FIRM">RepID=A6NPF2_9FIRM
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:EDN02034.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
trkA; potassium transporter peripheral membrane protein
L2_047_362G1_scaffold_196_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9016..10452
DNA (1437bp) protein (479aa)
TrkH family potassium uptake protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C6M1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56300.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
trkH; Trk system potassium uptake protein TrkH
L2_047_362G1_scaffold_196_10
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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10833..12959
DNA (2127bp) protein (709aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; Pyrophosphate-energized inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01129}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hppA; pyrophosphate-energized inorganic pyrophosphatase (EC:3.6.1.1)
Putative K(+)-stimulated pyrophosphate-energized sodium pump n=2 Tax=Oscillibacter RepID=U2PX13_9FIRM
L2_047_362G1_scaffold_196_11
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13205..15415
DNA (2211bp) protein (737aa)
Aconitase family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZI6_9FIRM
Aconitase family protein {ECO:0000313|EMBL:EDM98835.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hydratase
L2_047_362G1_scaffold_196_12
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15467..16117
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NSX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00532.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Uncharacterized metal-binding protein conserved in archaea
L2_047_362G1_scaffold_196_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16228..17199
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47065.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
L2_047_362G1_scaffold_196_14
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17196..17969
DNA (774bp) protein (258aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZJ2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM98841.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ATPase component of Mn/Zn ABC-type transporter
L2_047_362G1_scaffold_196_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17966..18835
DNA (870bp) protein (290aa)
Zinc transport system permease n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE21_9FIRM
Zinc transport system permease {ECO:0000313|EMBL:EGJ47067.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Mn2+/Zn2+ ABC transporter permease
L2_047_362G1_scaffold_196_16
Treponema azotonutricium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

18853..19443
DNA (591bp) protein (197aa)
Putative uncharacterized protein n=1 Tax=Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9) RepID=F5YC97_TREAZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF80873.1}; TaxID=545695 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema azotonutricium (strain ATCC BAA-888 / DSM 13862 / ZAS-9).;"
L2_047_362G1_scaffold_196_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19556..20002)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YX06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM38079.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L2_047_362G1_scaffold_196_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20039..20605)
DNA (567bp) protein (189aa)
Elongation factor P (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YX07_9FIRM
Elongation factor P {ECO:0000256|RuleBase:RU004390}; Flags: Fragment;; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
efp; elongation factor P
L2_047_362G1_scaffold_196_19
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20726..21790)
DNA (1065bp) protein (355aa)
proline aminopeptidase (EC:3.4.-.-)
Creatinase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AYY8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF54479.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_047_362G1_scaffold_196_20
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21833..22381)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CT51_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG57729.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L2_047_362G1_scaffold_196_21
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22381..23259)
DNA (879bp) protein (293aa)
probable deoxyribonuclease IV (EC:3.1.21.2)
AP endonuclease, family 2 n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1L7_9FIRM
AP endonuclease, family 2 {ECO:0000313|EMBL:EDM97909.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_047_362G1_scaffold_196_22
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23264..23761)
DNA (498bp) protein (166aa)
HAD phosphatase, family IIIA {ECO:0000313|EMBL:EDM97908.1}; EC=3.1.3.- {ECO:0000313|EMBL:EDM97908.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
HAD phosphatase, family IIIA n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6P1L6_9FIRM
hypothetical protein
L2_047_362G1_scaffold_196_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23837..24610
DNA (774bp) protein (258aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YX12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54504.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_047_362G1_scaffold_196_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24697..25302
DNA (606bp) protein (202aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CF21_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32760.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
DNA polymerase beta domain-containing protein
L2_047_362G1_scaffold_196_25
Firmicutes bacterium CAG:114, Firmicutes, Bacteria

Not on your lists

comp(25356..25538)
DNA (183bp) protein (61aa)
30S ribosomal protein S21 n=1 Tax=Firmicutes bacterium CAG:114 RepID=R5HDU8_9FIRM
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1263001 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:114.;"
rpsU; 30S ribosomal protein S21
L2_047_362G1_scaffold_196_26
Roseburia sp. CAG:100, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25765..26190
DNA (426bp) protein (142aa)
Acetyltransferases (EC:2.3.1.-)
Acetyltransferases n=1 Tax=Roseburia sp. CAG:100 RepID=R7R6A8_9FIRM
Acetyltransferases {ECO:0000313|EMBL:CDF45240.1}; TaxID=1262940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:100.;"
L2_047_362G1_scaffold_196_27
Fusobacterium hwasookii, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(26313..27074)
DNA (762bp) protein (254aa)
Methyltransferase domain protein n=1 Tax=Fusobacterium periodonticum ATCC 33693 RepID=D4CVA0_9FUSO
Methyltransferase {ECO:0000313|EMBL:EJU08639.1}; TaxID=1216362 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium hwasookii ChDC F128.;"
hypothetical protein
L2_047_362G1_scaffold_196_28
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27313..28116
DNA (804bp) protein (268aa)
Copper amine oxidase domain protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZP1_9FIRM
Copper amine oxidase domain protein {ECO:0000313|EMBL:EDM98394.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative cell wall hydrolase
L2_047_362G1_scaffold_196_29
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28117..29910)
DNA (1794bp) protein (598aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUM4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDN00075.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
ABC transporter ATP-binding protein
L2_047_362G1_scaffold_196_30
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30014..30439
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7G7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35532.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
Displaying items 1-30 of 71 in total

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