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L2_047_362G1_scaffold_247

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_247_1
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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3..878
DNA (876bp) protein (292aa)
RHS repeat-associated core domain protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LSL5_9FIRM
RHS repeat-associated core domain protein {ECO:0000313|EMBL:CDB86634.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
L2_047_362G1_scaffold_247_2
unknown

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887..1378
DNA (492bp) protein (164aa)

This feature has no annotations

L2_047_362G1_scaffold_247_3
unknown

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1699..1794
DNA (96bp) protein (32aa)

This feature has no annotations

L2_047_362G1_scaffold_247_4
unknown

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1982..2305
DNA (324bp) protein (108aa)

This feature has no annotations

L2_047_362G1_scaffold_247_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2538..3479
DNA (942bp) protein (314aa)
Putative stage III sporulation protein AA n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YNK1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55973.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spoIIIAA; stage III sporulation protein AA
L2_047_362G1_scaffold_247_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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3476..3991
DNA (516bp) protein (172aa)
Stage III sporulation protein AB n=3 Tax=Clostridiales RepID=H1C721_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55974.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spoIIIAB; stage III sporulation protein SpoIIIAB
L2_047_362G1_scaffold_247_7
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4022..4216
DNA (195bp) protein (65aa)
Stage III sporulation protein AC n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV02_9FIRM
Stage III sporulation protein AC {ECO:0000313|EMBL:EDN00203.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
spoIIIAC; stage III sporulation protein AC
L2_047_362G1_scaffold_247_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4220..4606
DNA (387bp) protein (129aa)
Stage III sporulation protein AD n=3 Tax=Clostridiales RepID=H1C723_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55976.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spoIIIAD; putative stage III sporulation protein AD
L2_047_362G1_scaffold_247_9
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4639..5760
DNA (1122bp) protein (374aa)
Stage III sporulation protein AE n=2 Tax=Clostridiales RepID=H1C724_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55977.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
spoIIIAE; putative stage III sporulation protein AE
L2_047_362G1_scaffold_247_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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5757..6251
DNA (495bp) protein (165aa)
Stage III sporulation protein AF n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C725_9FIRM
Stage III sporulation protein AF {ECO:0000313|EMBL:EHO35612.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
spoIIIAF; putative stage III sporulation protein AF
L2_047_362G1_scaffold_247_11
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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6248..6781
DNA (534bp) protein (178aa)
Putative stage III sporulation protein AG n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUZ8_9FIRM
Putative stage III sporulation protein AG {ECO:0000313|EMBL:EDN00199.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
spoIIIAG; putative stage III sporulation protein AG
L2_047_362G1_scaffold_247_12
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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6796..7392
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00198.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
spoIIIAH; putative stage III sporulation protein AH
L2_047_362G1_scaffold_247_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7676..8062
DNA (387bp) protein (129aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=G9YNJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERI62694.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L2_047_362G1_scaffold_247_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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8215..8715
DNA (501bp) protein (167aa)
N utilization substance protein B homolog n=3 Tax=Clostridiales RepID=G9YNJ2_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
nusB; antitermination protein NusB
L2_047_362G1_scaffold_247_15
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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8718..9653
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C730_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35617.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
peptidase M22 glycoprotease
L2_047_362G1_scaffold_247_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9650..10864
DNA (1215bp) protein (405aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
xseA; exonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2ARH4_9CLOT
L2_047_362G1_scaffold_247_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10867..11100
DNA (234bp) protein (78aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
xseB; exonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=2 Tax=Clostridiales RepID=H1C732_9FIRM
L2_047_362G1_scaffold_247_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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11106..11987
DNA (882bp) protein (294aa)
farnesyl-diphosphate synthase (EC:2.5.1.10)
Polyprenyl synthetase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUZ1_9FIRM
Polyprenyl synthetase {ECO:0000313|EMBL:EDN00192.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_047_362G1_scaffold_247_19
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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11994..12458
DNA (465bp) protein (155aa)
Divergent PAP2 family n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUZ0_9FIRM
Divergent PAP2 family {ECO:0000313|EMBL:EDN00191.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_047_362G1_scaffold_247_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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12529..14376
DNA (1848bp) protein (616aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUY9_9FIRM
L2_047_362G1_scaffold_247_21
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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14369..15181
DNA (813bp) protein (271aa)
Ribosomal RNA large subunit methyltransferase J {ECO:0000313|EMBL:EDN00189.1}; EC=2.1.1.- {ECO:0000313|EMBL:EDN00189.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUY8_9FIRM
putative hemolysin
L2_047_362G1_scaffold_247_22
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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15178..16047
DNA (870bp) protein (290aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=3 Tax=Clostridiales RepID=G9YNI4_9FIRM
L2_047_362G1_scaffold_247_23
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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16053..16505
DNA (453bp) protein (151aa)
Arginine repressor n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUY6_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
argR; arginine repressor
L2_047_362G1_scaffold_247_24
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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16525..18228
DNA (1704bp) protein (568aa)
DNA repair protein RecN n=2 Tax=Clostridiales RepID=H1C739_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
recN; DNA repair protein RecN
L2_047_362G1_scaffold_247_25
unknown

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18215..18748
DNA (534bp) protein (178aa)

This feature has no annotations

L2_047_362G1_scaffold_247_26
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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19272..20498
DNA (1227bp) protein (409aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUY1_9FIRM
L2_047_362G1_scaffold_247_27
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20687..21820
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NUY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00181.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
permease
L2_047_362G1_scaffold_247_28
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22122..22862)
DNA (741bp) protein (247aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
dapB; 4-hydroxy-tetrahydrodipicolinate reductase (EC:1.17.1.-)
4-hydroxy-tetrahydrodipicolinate reductase n=3 Tax=Clostridiales RepID=G9YNH9_9FIRM
L2_047_362G1_scaffold_247_29
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22900..23517)
DNA (618bp) protein (206aa)
Sortase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9CCN8_9CLOT
Sortase {ECO:0000313|EMBL:EOR27028.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
sortase
L2_047_362G1_scaffold_247_30
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23592..24506)
DNA (915bp) protein (305aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NV42_9FIRM
Displaying items 1-30 of 67 in total

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