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L2_047_362G1_scaffold_276

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Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_276_1
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(139..1644)
DNA (1506bp) protein (502aa)
carboxypeptidase Taq (EC:3.4.17.19)
Carboxypeptidase Taq n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RT71_9FIRM
Carboxypeptidase Taq {ECO:0000313|EMBL:CCZ36037.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_047_362G1_scaffold_276_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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1845..3500
DNA (1656bp) protein (552aa)
Glycosidases (EC:3.2.1.10)
Alpha amylase catalytic domain protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R656_9FIRM
Alpha amylase catalytic domain protein {ECO:0000313|EMBL:CCZ36038.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_047_362G1_scaffold_276_3
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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3616..4524
DNA (909bp) protein (303aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RBA1_9FIRM
L2_047_362G1_scaffold_276_4
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

4521..5285
DNA (765bp) protein (255aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
3-dehydroquinate dehydratase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4D7_9FIRM
3-dehydroquinate dehydratase
L2_047_362G1_scaffold_276_5
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

5470..6318
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RMQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36041.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
peptidase U4 sporulation factor SpoIIGA
L2_047_362G1_scaffold_276_6
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

6332..7069
DNA (738bp) protein (246aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RT76_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
RNA polymerase, sigma 29 subunit, SigE
L2_047_362G1_scaffold_276_7
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

7203..7412
DNA (210bp) protein (70aa)
FeoA family protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R661_9FIRM
FeoA family protein {ECO:0000313|EMBL:CCZ36043.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Fe2+ transporter A
L2_047_362G1_scaffold_276_8
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

7445..7669
DNA (225bp) protein (75aa)
Fe2+ transport system protein A n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RBA5_9FIRM
Fe2+ transport system protein A {ECO:0000313|EMBL:CCZ36044.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Fe2+ transport system protein A
L2_047_362G1_scaffold_276_9
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

7734..9890
DNA (2157bp) protein (719aa)
Ferrous iron transporter B n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4E0_9FIRM
Ferrous iron transporter B {ECO:0000313|EMBL:CCZ36045.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
ferrous iron transport protein B
L2_047_362G1_scaffold_276_10
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

9893..10087
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RMR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36046.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_047_362G1_scaffold_276_11
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(10533..11390)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RT80_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36047.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Transposase domain (DUF772).
L2_047_362G1_scaffold_276_12
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

11588..12958
DNA (1371bp) protein (457aa)
MATE efflux family protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R665_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCZ36048.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
putative efflux protein, MATE family
L2_047_362G1_scaffold_276_13
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

13056..13838
DNA (783bp) protein (261aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RBA6_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
RNA polymerase, sigma subunit, RpsG/SigG
L2_047_362G1_scaffold_276_14
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(13850..14542)
DNA (693bp) protein (231aa)
Putative membrane protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4E4_9FIRM
Putative membrane protein {ECO:0000313|EMBL:CCZ36050.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_047_362G1_scaffold_276_15
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(14535..15257)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RMR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36051.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_047_362G1_scaffold_276_16
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(15361..16500)
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RT82_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36052.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
abortive infection protein
L2_047_362G1_scaffold_276_17
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(16625..16879)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R668_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36053.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
sporulation protein, YlmC/YmxH family
L2_047_362G1_scaffold_276_18
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

17121..17570
DNA (450bp) protein (150aa)
Transcriptional repressor NrdR n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RBA9_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
transcriptional regulator NrdR
L2_047_362G1_scaffold_276_19
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

17670..18989
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4E8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36055.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
putative methionine transporter, NhaC family (TC 2.A.35.1.-)
L2_047_362G1_scaffold_276_20
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

19013..20233
DNA (1221bp) protein (407aa)
Aspartate/tyrosine/aromatic aminotransferase (EC:2.6.1.-)
Aspartate aminotransferase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RMR9_9FIRM
Aspartate aminotransferase {ECO:0000313|EMBL:CCZ36056.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L2_047_362G1_scaffold_276_21
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(20339..20707)
DNA (369bp) protein (123aa)
Transcriptional regulator ArsR family n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RT86_9FIRM
Transcriptional regulator ArsR family {ECO:0000313|EMBL:CCZ36057.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
ArsR family transcriptional regulator
L2_047_362G1_scaffold_276_22
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

20903..21640
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R671_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36058.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
ABC-type transport system involved in Fe-S cluster assembly, ATPase component
L2_047_362G1_scaffold_276_23
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

21641..22567
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RBB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36059.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
ABC-type transport system involved in Fe-S cluster assembly, permease component
L2_047_362G1_scaffold_276_24
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

22718..23251
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4F1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36060.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_047_362G1_scaffold_276_25
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

23297..23671
DNA (375bp) protein (125aa)
Endoribonuclease L-PSP n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RMS2_9FIRM
Endoribonuclease L-PSP {ECO:0000313|EMBL:CCZ36061.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
endoribonuclease L-PSP
L2_047_362G1_scaffold_276_26
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

23979..24740
DNA (762bp) protein (254aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
pseudouridylate synthase I (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RT88_9FIRM
L2_047_362G1_scaffold_276_27
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

24759..25367
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R673_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36063.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L2_047_362G1_scaffold_276_28
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(25430..25909)
DNA (480bp) protein (160aa)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO:0000256|HAMAP-Rule:MF_00091}; Autoinducer-2 production protein LuxS {ECO:0000256|HAMAP-Rule:MF_00091}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
LuxS protein involved in autoinducer AI2 synthesis (EC:4.4.1.21)
S-ribosylhomocysteine lyase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RBB5_9FIRM
L2_047_362G1_scaffold_276_29
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

26217..27575
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4F3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36065.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L2_047_362G1_scaffold_276_30
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(27633..28121)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RT92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ36067.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
Displaying items 1-30 of 64 in total

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