ggKbase home page

L2_047_362G1_scaffold_300

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_300_1
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87..761)
DNA (675bp) protein (225aa)
ABC transporter ATP-binding protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LC73_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDB85098.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
ABC transporter ATP-binding protein
L2_047_362G1_scaffold_300_2
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(758..1972)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LNI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85099.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
permease
L2_047_362G1_scaffold_300_3
unknown

Not on your lists

comp(2028..2138)
DNA (111bp) protein (37aa)

This feature has no annotations

L2_047_362G1_scaffold_300_4
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2275..3375)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LH08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85100.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
ssuA2; aliphatic sulfonates ABC transporter substrate-binding protein SsuA
L2_047_362G1_scaffold_300_5
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3442..4230)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LSI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85101.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component
L2_047_362G1_scaffold_300_6
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4232..5248)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6MGS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85102.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
ssuC2; aliphatic sulfonates ABC transporter permease SsuC
L2_047_362G1_scaffold_300_7
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5456..5875
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LC76_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85103.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L2_047_362G1_scaffold_300_8
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6047..6814)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LNJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85104.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Indigoidine synthase A family protein
L2_047_362G1_scaffold_300_9
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6937..7050)
DNA (114bp) protein (38aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LH11_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85105.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_047_362G1_scaffold_300_10
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7079..8479)
DNA (1401bp) protein (467aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LSI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85106.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L2_047_362G1_scaffold_300_11
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8584..10116)
DNA (1533bp) protein (511aa)
Sigma-70 region 4 n=1 Tax=Coprococcus comes CAG:19 RepID=R6MGS9_9FIRM
Sigma-70 region 4 {ECO:0000313|EMBL:CDB85107.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
RNA polymerase sigma factor, sigma-70 family
L2_047_362G1_scaffold_300_12
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10314..10802)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LC81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85108.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L2_047_362G1_scaffold_300_13
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10892..11866)
DNA (975bp) protein (325aa)
Lysophospholipase (EC:3.1.1.5)
Hydrolase alpha/beta domain protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LNK0_9FIRM
Hydrolase alpha/beta domain protein {ECO:0000313|EMBL:CDB85109.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_047_362G1_scaffold_300_14
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12072..13706)
DNA (1635bp) protein (545aa)
Na/Pi-cotransporter II-like protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BDP7_9FIRM
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EEG88593.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Na/Pi-cotransporter II-like protein
L2_047_362G1_scaffold_300_15
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13855..14211)
DNA (357bp) protein (119aa)
Stage V sporulation protein AE n=2 Tax=Coprococcus RepID=C0BDP6_9FIRM
Stage V sporulation protein AE {ECO:0000313|EMBL:EEG88592.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
stage V sporulation protein AE
L2_047_362G1_scaffold_300_16
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14225..15235)
DNA (1011bp) protein (337aa)
Stage V sporulation protein AD n=3 Tax=root RepID=C0BDP5_9FIRM
Stage V sporulation protein AD {ECO:0000313|EMBL:CDB85119.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Stage V sporulation protein AD (SpoVAD).
L2_047_362G1_scaffold_300_17
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15252..15710)
DNA (459bp) protein (153aa)
Putative stage V sporulation protein AC n=3 Tax=root RepID=C0BDP4_9FIRM
Putative stage V sporulation protein AC {ECO:0000313|EMBL:CDB85120.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
stage V sporulation AC, SpoVAC
L2_047_362G1_scaffold_300_18
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15723..16139)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LSJ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85121.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L2_047_362G1_scaffold_300_19
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16129..16764)
DNA (636bp) protein (212aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6MGT9_9FIRM
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:CDB85122.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Stage V sporulation protein AA.
L2_047_362G1_scaffold_300_20
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16748..16930)
DNA (183bp) protein (61aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0BDP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85123.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_047_362G1_scaffold_300_21
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17005..17724)
DNA (720bp) protein (240aa)
RNA polymerase sigma factor n=2 Tax=Coprococcus RepID=C0BDP0_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
RNA polymerase sigma-F factor
L2_047_362G1_scaffold_300_22
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17703..18173)
DNA (471bp) protein (157aa)
anti-sigma F factor (EC:2.7.11.1)
Anti-sigma F factor n=2 Tax=Coprococcus RepID=C0BDN9_9FIRM
Anti-sigma F factor {ECO:0000313|EMBL:CDB85125.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_047_362G1_scaffold_300_23
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18173..18487)
DNA (315bp) protein (105aa)
Anti-sigma factor antagonist n=2 Tax=Coprococcus RepID=C0BDN8_9FIRM
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
anti-anti-sigma factor
L2_047_362G1_scaffold_300_24
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18681..20051)
DNA (1371bp) protein (457aa)
Tetratricopeptide repeat protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BDN7_9FIRM
Tetratricopeptide repeat protein {ECO:0000313|EMBL:EEG88583.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L2_047_362G1_scaffold_300_25
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20063..20197)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LC99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB85128.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L2_047_362G1_scaffold_300_26
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20190..21497)
DNA (1308bp) protein (436aa)
folylpolyglutamate synthase/dihydrofolate synthase (EC:6.3.2.12 6.3.2.17)
Bifunctional protein FolC n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BDN5_9FIRM
Bifunctional protein FolC {ECO:0000313|EMBL:EEG88581.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L2_047_362G1_scaffold_300_27
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21527..23809)
DNA (2283bp) protein (761aa)
Arylsulfatase n=2 Tax=Coprococcus RepID=R6LH29_9FIRM
Arylsulfatase {ECO:0000313|EMBL:CDB85130.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L2_047_362G1_scaffold_300_28
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(23917..26571)
DNA (2655bp) protein (885aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Coprococcus comes CAG:19 RepID=R6LSK3_9FIRM
L2_047_362G1_scaffold_300_29
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27022..28293)
DNA (1272bp) protein (424aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Coprococcus comes CAG:19 RepID=R6MGU5_9FIRM
L2_047_362G1_scaffold_300_30
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28310..28936)
DNA (627bp) protein (209aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Coprococcus comes CAG:19 RepID=R6LCA3_9FIRM
Displaying items 1-30 of 57 in total

View Taxonomy