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L2_047_362G1_scaffold_329

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_329_1
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..912)
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=8 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RXC2_9FIRM
Transposase {ECO:0000313|EMBL:KJF38128.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
putative transposase for insertion sequence element
L2_047_362G1_scaffold_329_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1096..2205)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=U2BB06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF57103.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L2_047_362G1_scaffold_329_3
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2496..3338)
DNA (843bp) protein (281aa)
Prephenate dehydrogenase {ECO:0000313|EMBL:EDM99369.1}; EC=1.3.1.12 {ECO:0000313|EMBL:EDM99369.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Prephenate dehydrogenase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NX21_9FIRM
prephenate dehydrogenase
L2_047_362G1_scaffold_329_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3384..4400)
DNA (1017bp) protein (339aa)
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=3 Tax=Clostridiales RepID=G9YPU8_9FIRM
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EHM52348.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_047_362G1_scaffold_329_5
unknown

Not on your lists

comp(4405..4560)
DNA (156bp) protein (52aa)

This feature has no annotations

L2_047_362G1_scaffold_329_6
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4675..4920)
DNA (246bp) protein (82aa)
Putative Xre family DNA-binding protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KQI3_OSCVS
putative Xre family DNA-binding protein
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:BAK97265.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L2_047_362G1_scaffold_329_7
unknown

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comp(5357..5512)
DNA (156bp) protein (52aa)

This feature has no annotations

L2_047_362G1_scaffold_329_8
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5652..6530
DNA (879bp) protein (293aa)
LysR substrate binding domain protein n=2 Tax=Clostridiales RepID=G9YM19_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54332.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
LysR family transcriptional regulator
L2_047_362G1_scaffold_329_9
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

6594..6836
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B3R7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47547.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L2_047_362G1_scaffold_329_10
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6882..7637)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M898_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67063.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
TipAS antibiotic-recognition domain-containing protein
L2_047_362G1_scaffold_329_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7749..9182)
DNA (1434bp) protein (478aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Serine-type D-Ala-D-Ala carboxypeptidase n=2 Tax=Clostridiales RepID=U2BUR1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF52517.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L2_047_362G1_scaffold_329_12
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9235..9675
DNA (441bp) protein (147aa)
ComEA protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CI49_9FIRM
ComEA protein {ECO:0000313|EMBL:EHO29588.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_047_362G1_scaffold_329_13
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9704..10390
DNA (687bp) protein (229aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CI50_9FIRM
Putative transcriptional regulatory protein WalR {ECO:0000313|EMBL:ERI75551.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
OmpR family two-component response regulator
L2_047_362G1_scaffold_329_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10432..11901
DNA (1470bp) protein (490aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative two-component histidine kinase (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YP97_9FIRM
L2_047_362G1_scaffold_329_15
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11898..12830
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDM98838.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
putative germination protein
L2_047_362G1_scaffold_329_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12916..14199
DNA (1284bp) protein (428aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZI8_9FIRM
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:EDM98837.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_047_362G1_scaffold_329_17
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14286..14825)
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IMH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57589.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
Multimeric flavodoxin WrbA
L2_047_362G1_scaffold_329_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15106..15876)
DNA (771bp) protein (257aa)
Putative sporulation transcription factor Spo0A n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPA5_9FIRM
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
sporulation transcriptional activator Spo0A
L2_047_362G1_scaffold_329_19
Megasphaera sp. NM10, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16155..16523
DNA (369bp) protein (123aa)
Uncharacterized protein n=2 Tax=Megasphaera RepID=S7HKX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPP15811.1}; TaxID=1273103 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. NM10.;"
N-terminal domain of molybdenum-binding protein
L2_047_362G1_scaffold_329_20
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16645..17754)
DNA (1110bp) protein (370aa)
SpoIVB peptidase {ECO:0000313|EMBL:EDN01126.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDN01126.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
S55 family peptidase (EC:3.4.21.-)
SpoIVB peptidase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NS88_9FIRM
L2_047_362G1_scaffold_329_21
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18027..18548
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPV0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01875.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_047_362G1_scaffold_329_22
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19188..20621)
DNA (1434bp) protein (478aa)
Aspartyl-tRNA(Asn) amidotransferase subunit A @ Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000313|EMBL:CDY74675.1}; EC=6.3.5.6 {ECO:0000313|EMBL:CDY74675.1};; EC=6.3.5.7 {ECO:0000313|EMBL:CDY74675.1};; Glutamyl-tRNA amidotransferase {ECO:0000313|EMBL:KDR40287.1}; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
amidase (EC:3.5.1.4)
Amidase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4D212_PSEUX
L2_047_362G1_scaffold_329_23
unknown

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comp(20631..20837)
DNA (207bp) protein (69aa)

This feature has no annotations

L2_047_362G1_scaffold_329_24
Burkholderia graminis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20902..22305)
DNA (1404bp) protein (468aa)
Amidase {ECO:0000313|EMBL:EDT08744.1}; EC=3.5.1.4 {ECO:0000313|EMBL:EDT08744.1};; TaxID=396598 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia graminis C4D1M.;"
amidase (EC:3.5.1.4)
Amidase n=1 Tax=Burkholderia graminis C4D1M RepID=B1G4X5_9BURK
L2_047_362G1_scaffold_329_25
unknown

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comp(22311..22517)
DNA (207bp) protein (69aa)

This feature has no annotations

L2_047_362G1_scaffold_329_26
unknown

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comp(22660..22809)
DNA (150bp) protein (50aa)

This feature has no annotations

L2_047_362G1_scaffold_329_27
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22854..24350)
DNA (1497bp) protein (499aa)
Na+/solute symporter n=1 Tax=Methylomonas methanica (strain MC09) RepID=G0A4J9_METMM
Na+/solute symporter
Sodium:proline symporter {ECO:0000313|EMBL:KDR94424.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
L2_047_362G1_scaffold_329_28
RBG_19FT_COMBO_Chloroflexi_47_15_curated, Chloroflexi, Bacteria

Not on your lists

comp(24458..25333)
DNA (876bp) protein (292aa)
enoyl-CoA hydratase n=1 Tax=Pseudomonas pelagia RepID=UPI00039D1EBF
enoyl-CoA hydratase
Tax=RBG_19FT_COMBO_Chloroflexi_47_15_curated
L2_047_362G1_scaffold_329_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25352..26677)
DNA (1326bp) protein (442aa)
Putative butyryl-CoA:acetate CoA-transferase n=2 Tax=Oscillibacter RepID=U2QK18_9FIRM
Putative butyryl-CoA:acetate CoA-transferase {ECO:0000313|EMBL:ERK66413.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
4-hydroxybutyrate CoA-transferase
L2_047_362G1_scaffold_329_30
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26674..27813)
DNA (1140bp) protein (380aa)
Acyl-CoA dehydrogenase n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7WCY0_DESOD
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AET66886.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
Displaying items 1-30 of 56 in total

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