ggKbase home page

L2_047_362G1_scaffold_391

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_391_1
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..738
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6SJW5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC55706.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
Non-ribosomal peptide synthetase modules and related proteins
L2_047_362G1_scaffold_391_2
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

725..1924
DNA (1200bp) protein (400aa)
Diaminopimelate decarboxylase (EC:4.1.1.20)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KTK6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37147.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
L2_047_362G1_scaffold_391_3
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1927..2157
DNA (231bp) protein (77aa)
Phosphopantetheine attachment site. (EC:6.1.1.13)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NFZ3_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06447.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L2_047_362G1_scaffold_391_4
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2160..3686
DNA (1527bp) protein (509aa)
MBOAT family protein n=2 Tax=Clostridiales RepID=B0NFZ4_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN37144.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Predicted membrane protein involved in D-alanine export
L2_047_362G1_scaffold_391_5
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3673..4662
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NG17_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS06471.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
hypothetical protein
L2_047_362G1_scaffold_391_6
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4781..5683
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Z2F9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD58214.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
dTDP-glucose pyrophosphorylase
L2_047_362G1_scaffold_391_7
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5709..7541
DNA (1833bp) protein (611aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KTI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37125.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
L2_047_362G1_scaffold_391_8
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7616..9223
DNA (1608bp) protein (536aa)
Choline binding protein A n=1 Tax=Blautia sp. CAG:52 RepID=R6GIR1_9FIRM
Choline binding protein A {ECO:0000313|EMBL:CDB21126.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
N-acetylmuramoyl-L-alanine amidase family protein
L2_047_362G1_scaffold_391_9
Lachnospiraceae bacterium CAG:215, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9371..11131
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium CAG:215 RepID=R6EG70_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA98915.1}; TaxID=1262985 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:215.;"
CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes
L2_047_362G1_scaffold_391_10
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11124..11861
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LAV3_BLAHA
Uncharacterized protein {ECO:0000313|EMBL:EEX20771.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
choline kinase / choline-phosphate cytidylyltransferase
L2_047_362G1_scaffold_391_11
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11848..13386
DNA (1539bp) protein (513aa)
Choline-glycine betaine transporter n=1 Tax=Ruminococcus torques L2-14 RepID=D4M4U7_9FIRM
Choline-glycine betaine transporter
Choline-glycine betaine transporter {ECO:0000313|EMBL:CBL26259.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
L2_047_362G1_scaffold_391_12
Parvimonas micra, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13404..14483
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SIX4_9FIRM
membrane protein
Membrane protein {ECO:0000313|EMBL:AIZ35975.1}; TaxID=33033 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Parvimonas.;" source="Parvimonas micra.;"
L2_047_362G1_scaffold_391_13
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14629..16125
DNA (1497bp) protein (499aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KSA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38991.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
N-acetylmuramoyl-L-alanine amidase family protein
L2_047_362G1_scaffold_391_14
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16172..18163
DNA (1992bp) protein (664aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G3Z1_9FIRM
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EDR47885.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
N-acetylmuramoyl-L-alanine amidase
L2_047_362G1_scaffold_391_15
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18197..20512
DNA (2316bp) protein (772aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Dorea formicigenerans ATCC 27755 RepID=B0G3Z1_9FIRM
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EDR47885.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
ErfK/YbiS/YcfS/YnhG family protein
L2_047_362G1_scaffold_391_16
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20689..23088
DNA (2400bp) protein (800aa)
Metallo-beta-lactamase domain protein n=1 Tax=Blautia hansenii DSM 20583 RepID=C9LB39_BLAHA
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EEX20674.1}; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
pce1; teichoic acid phosphorylcholine esterase/choline binding protein E, Pce1
L2_047_362G1_scaffold_391_17
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23166..24473
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NB43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80520.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
exopolysaccharide biosynthesis protein
L2_047_362G1_scaffold_391_18
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24457..25347
DNA (891bp) protein (297aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_57FAA RepID=F7KS98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38982.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
lipopolysaccharide cholinephosphotransferase
L2_047_362G1_scaffold_391_19
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25337..26491
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Dorea formicigenerans CAG:28 RepID=R6S9L3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC56715.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigenerans CAG:28.;"
hypothetical protein
L2_047_362G1_scaffold_391_20
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26494..27186
DNA (693bp) protein (231aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WPH1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX76689.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L2_047_362G1_scaffold_391_21
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27199..27549
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NB30_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80524.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_047_362G1_scaffold_391_22
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27586..29592
DNA (2007bp) protein (669aa)
Uncharacterized protein n=2 Tax=Dorea sp. 5-2 RepID=R9NB46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS80525.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
hypothetical protein
L2_047_362G1_scaffold_391_23
Roseburia inulinivorans CAG:15, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29617..32610
DNA (2994bp) protein (998aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans CAG:15 RepID=R5HJ37_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY29775.1}; TaxID=1263105 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia inulinivorans CAG:15.;"
putative glycosyltransferase
L2_047_362G1_scaffold_391_24
Clostridium sp. D5, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32622..33398
DNA (777bp) protein (259aa)
Polysaccharide ABC transporter membrane-spanning protein n=1 Tax=Clostridium sp. D5 RepID=F0Z3U7_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=556261 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. D5.;"
ABC-2 type transporter
L2_047_362G1_scaffold_391_25
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33407..34141
DNA (735bp) protein (245aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NG32_CLOSV
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDS06486.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ABC transporter
L2_047_362G1_scaffold_391_26
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34153..34755
DNA (603bp) protein (201aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B7F9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20712.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L2_047_362G1_scaffold_391_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34764..36563
DNA (1800bp) protein (600aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDN75901.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDN75901.1};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B7F8_RUMGN
Predicted glycosyltransferases
L2_047_362G1_scaffold_391_28
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36622..38109
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2AQ04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ26564.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
glycosyl transferase family 2
L2_047_362G1_scaffold_391_29
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38114..38563
DNA (450bp) protein (150aa)
Acetyltransferase, GNAT family n=1 Tax=Beggiatoa sp. PS RepID=A7BVF0_9GAMM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDN69483.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
putative MarR-family transcriptional regulator
L2_047_362G1_scaffold_391_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38583..39548
DNA (966bp) protein (322aa)
Carbamoyl-phosphate synthase large subunit n=1 Tax=Clostridium bolteae 90B8 RepID=R0BKK2_9CLOT
Carbamoyl-phosphate synthase large subunit {ECO:0000313|EMBL:ENZ45494.1}; TaxID=997897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90B8.;"
hypothetical protein
Displaying items 1-30 of 35 in total

View Taxonomy