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L2_047_362G1_scaffold_397

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_397_1
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..507)
DNA (507bp) protein (169aa)
Elongation factor Tu n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NZ22_9FIRM
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
translation elongation factor Tu
L2_047_362G1_scaffold_397_2
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(636..2741)
DNA (2106bp) protein (702aa)
Elongation factor G n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9L8_9FIRM
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
fusA; elongation factor G
L2_047_362G1_scaffold_397_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2760..3281)
DNA (522bp) protein (174aa)
30S ribosomal protein S7 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9L9_9FIRM
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpsG; 30S ribosomal protein S7
L2_047_362G1_scaffold_397_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3414..3836)
DNA (423bp) protein (141aa)
30S ribosomal protein S12 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9M0_9FIRM
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpsL; 30S ribosomal protein S12
L2_047_362G1_scaffold_397_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3938..4177)
DNA (240bp) protein (80aa)
Large subunit ribosomal protein L7A n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9M1_9FIRM
Large subunit ribosomal protein L7A {ECO:0000313|EMBL:EGJ48347.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
ribosomal protein L7Ae-like protein
L2_047_362G1_scaffold_397_6
Firmicutes bacterium ASF500, Firmicutes, Bacteria

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4533..5783
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YHS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL15117.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_047_362G1_scaffold_397_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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5934..6122
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ48348.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
4Fe-4S ferredoxin
L2_047_362G1_scaffold_397_8
unknown

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comp(6273..6368)
DNA (96bp) protein (32aa)

This feature has no annotations

L2_047_362G1_scaffold_397_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6842..8218)
DNA (1377bp) protein (459aa)
serine protease (EC:3.4.21.-)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEF4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46454.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_362G1_scaffold_397_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8433..9590)
DNA (1158bp) protein (386aa)
Sporulation integral membrane protein YtvI n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEF3_9FIRM
Sporulation integral membrane protein YtvI {ECO:0000313|EMBL:EGJ46453.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
sporulation integral membrane protein YtvI
L2_047_362G1_scaffold_397_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9699..10568)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46452.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
EDD domain protein, DegV family
L2_047_362G1_scaffold_397_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10652..10861)
DNA (210bp) protein (70aa)
UPF0291 protein HMPREF0866_01471 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEF1_9FIRM
UPF0291 protein HMPREF0866_01471 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_047_362G1_scaffold_397_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10906..11703)
DNA (798bp) protein (266aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XE63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46363.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_047_362G1_scaffold_397_14
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11975..12550
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46486.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
TetR family transcriptional regulator
L2_047_362G1_scaffold_397_15
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12596..15025
DNA (2430bp) protein (810aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46485.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_047_362G1_scaffold_397_16
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15012..18200
DNA (3189bp) protein (1063aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46484.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_047_362G1_scaffold_397_17
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18263..18811)
DNA (549bp) protein (183aa)
Nitroreductase n=1 Tax=Clostridium sp. CAG:590 RepID=R5E4J2_9CLOT
Nitroreductase {ECO:0000313|EMBL:CCX87413.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
Nitroreductase
L2_047_362G1_scaffold_397_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18929..20260)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEH4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46474.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
MatE efflux family protein
L2_047_362G1_scaffold_397_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20257..20739)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46475.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
MarR family transcripitonal regulator
L2_047_362G1_scaffold_397_20
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21082..22995)
DNA (1914bp) protein (638aa)
Chaperone protein HtpG n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEN0_9FIRM
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505, ECO:0000256|SAAS:SAAS00218406}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
htpG; chaperone protein HtpG
L2_047_362G1_scaffold_397_21
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

23245..23604
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YH43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14922.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
Predicted transcriptional regulators
L2_047_362G1_scaffold_397_22
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

23601..24326
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YEY0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14923.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
ABC transporter
L2_047_362G1_scaffold_397_23
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

24326..25105
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XYZ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL14924.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
ABC transporter permease
L2_047_362G1_scaffold_397_24
unknown

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25135..25413
DNA (279bp) protein (93aa)

This feature has no annotations

L2_047_362G1_scaffold_397_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25451..26017)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEM9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46529.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_047_362G1_scaffold_397_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26197..26823
DNA (627bp) protein (209aa)
Chloramphenicol O-acetyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XBF6_9FIRM
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:EGJ47684.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
chloramphenicol acetyltransferase
L2_047_362G1_scaffold_397_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26990..28321
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46531.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Hemolysins and related proteins containing CBS domains
L2_047_362G1_scaffold_397_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28474..28827)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEC5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46425.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_362G1_scaffold_397_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29079..30431)
DNA (1353bp) protein (451aa)
gdh; glutamate dehydrogenase (EC:1.4.1.2)
Glutamate dehydrogenase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEC4_9FIRM
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_362G1_scaffold_397_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30756..31613)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XEC3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46423.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
acetyltransferase
Displaying items 1-30 of 47 in total

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