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L2_047_362G1_scaffold_486

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_486_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..228
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C9S3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23847.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_047_362G1_scaffold_486_2
Enterococcus gilvus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(128..442)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Enterococcus gilvus ATCC BAA-350 RepID=R2V6C5_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOI53246.1}; TaxID=1158614 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gilvus ATCC BAA-350.;"
L2_047_362G1_scaffold_486_3
Enterococcus gilvus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(525..1562)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Enterococcus gilvus ATCC BAA-350 RepID=R2V669_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOI53245.1}; TaxID=1158614 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gilvus ATCC BAA-350.;"
Esterase/lipase
L2_047_362G1_scaffold_486_4
Enterococcus gilvus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2245..3339)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Enterococcus gilvus ATCC BAA-350 RepID=R2XEG2_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOI53244.1}; TaxID=1158614 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gilvus ATCC BAA-350.;"
Esterase/lipase
L2_047_362G1_scaffold_486_5
Enterococcus gilvus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3336..3692)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Enterococcus gilvus ATCC BAA-350 RepID=R2XF45_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOI53243.1}; TaxID=1158614 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gilvus ATCC BAA-350.;"
Bacterial alpha-L-rhamnosidase.
L2_047_362G1_scaffold_486_6
Enterococcus gilvus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(3959..5311)
DNA (1353bp) protein (451aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Enterococcus gilvus ATCC BAA-350 RepID=R2V6B9_9ENTE
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:EOI53241.1}; TaxID=1158614 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gilvus ATCC BAA-350.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L2_047_362G1_scaffold_486_7
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5326..8136)
DNA (2811bp) protein (937aa)
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2K8_9FIRM
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:CBL13848.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase.
L2_047_362G1_scaffold_486_8
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8350..10602)
DNA (2253bp) protein (751aa)
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CBL13852.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CBL13852.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2L2_9FIRM
L2_047_362G1_scaffold_486_9
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10626..12002)
DNA (1377bp) protein (459aa)
Na+/melibiose symporter and related transporters n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2L1_9FIRM
Na+/melibiose symporter and related transporters
Na+/melibiose symporter and related transporters {ECO:0000313|EMBL:CBL13851.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_047_362G1_scaffold_486_10
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12185..14824)
DNA (2640bp) protein (880aa)
Bacterial alpha-L-rhamnosidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2K9_9FIRM
Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:CBL13849.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Bacterial alpha-L-rhamnosidase.
L2_047_362G1_scaffold_486_11
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14839..17634)
DNA (2796bp) protein (932aa)
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2K8_9FIRM
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase {ECO:0000313|EMBL:CBL13848.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Alpha-L-rhamnosidase N-terminal domain./Bacterial alpha-L-rhamnosidase.
L2_047_362G1_scaffold_486_12
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17697..19949)
DNA (2253bp) protein (751aa)
Beta-glucosidase-related glycosidases {ECO:0000313|EMBL:CBL13846.1}; EC=3.2.1.21 {ECO:0000313|EMBL:CBL13846.1};; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
Beta-glucosidase-related glycosidases (EC:3.2.1.21)
Beta-glucosidase-related glycosidases n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2K6_9FIRM
L2_047_362G1_scaffold_486_13
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19985..21076)
DNA (1092bp) protein (364aa)
Esterase/lipase n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2K5_9FIRM
Esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:CBL13845.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_047_362G1_scaffold_486_14
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21291..21752
DNA (462bp) protein (154aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2K4_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBL13844.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_047_362G1_scaffold_486_15
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21810..22328
DNA (519bp) protein (173aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L2K4_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBL13844.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_047_362G1_scaffold_486_16
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22337..22888)
DNA (552bp) protein (184aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
L-rhamnulose 1-phosphate aldolase (EC:4.1.2.19)
Rhamnulose-1-phosphate aldolase n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9IUN4_9FIRM
L2_047_362G1_scaffold_486_17
unknown

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comp(22970..23206)
DNA (237bp) protein (79aa)

This feature has no annotations

L2_047_362G1_scaffold_486_18
unknown

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comp(23199..23624)
DNA (426bp) protein (142aa)

This feature has no annotations

L2_047_362G1_scaffold_486_19
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23621..23884)
DNA (264bp) protein (88aa)
Reverse transcriptase family protein n=1 Tax=Clostridium difficile F665 RepID=U4ZI25_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHF01082.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
L2_047_362G1_scaffold_486_20
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24314..24607)
DNA (294bp) protein (98aa)
ParB-like partition proteins n=3 Tax=Clostridiales RepID=D4JJA8_9FIRM
ParB-like partition proteins
ParB-like partition proteins {ECO:0000313|EMBL:CBL13327.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L2_047_362G1_scaffold_486_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25004..26698)
DNA (1695bp) protein (565aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C8T6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35113.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Site-specific recombinases, DNA invertase Pin homologs
L2_047_362G1_scaffold_486_22
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26661..26891)
DNA (231bp) protein (77aa)
Putative uncharacterized protein n=1 Tax=[Bacteroides] pectinophilus ATCC 43243 RepID=B7ANN7_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58772.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
hypothetical protein
L2_047_362G1_scaffold_486_23
[Bacteroides] pectinophilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26982..27167)
DNA (186bp) protein (62aa)
Putative uncharacterized protein n=3 Tax=root RepID=B7ANN6_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EEC58771.1}; TaxID=483218 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="[Bacteroides] pectinophilus ATCC 43243.;"
L2_047_362G1_scaffold_486_24
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27184..28473)
DNA (1290bp) protein (430aa)
Plasmid recombination enzyme n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KQV3_9FIRM
Plasmid recombination enzyme {ECO:0000313|EMBL:ERJ94460.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Plasmid recombination enzyme.
L2_047_362G1_scaffold_486_25
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28822..29037)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MHN7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL33270.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_362G1_scaffold_486_26
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29438..30811)
DNA (1374bp) protein (458aa)
Phage/plasmid primase, P4 family, C-terminal domain n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MHN6_9FIRM
phage/plasmid primase, P4 family, C-terminal domain
Phage/plasmid primase, P4 family, C-terminal domain {ECO:0000313|EMBL:CBL33269.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L2_047_362G1_scaffold_486_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30786..31406)
DNA (621bp) protein (207aa)
CHC2 zinc finger domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YL29_9FIRM
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EHM55003.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
DNA primase (bacterial type)
L2_047_362G1_scaffold_486_28
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31629..32732
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KQU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ94455.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
hypothetical protein
L2_047_362G1_scaffold_486_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32858..34033
DNA (1176bp) protein (392aa)
Uncharacterized protein n=2 Tax=unclassified Clostridiales RepID=G9YL26_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHM55000.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L2_047_362G1_scaffold_486_30
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34057..34740
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RR33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC47819.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
winged helix family two component transcriptional regulator
Displaying items 1-30 of 36 in total

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