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L2_047_362G1_scaffold_511

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_511_1
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(473..1429)
DNA (957bp) protein (319aa)
Abi-like protein n=1 Tax=Lachnospiraceae bacterium CAG:25 RepID=R5ZCI2_9FIRM
Abi-like protein {ECO:0000313|EMBL:CDA31836.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
hypothetical protein
L2_047_362G1_scaffold_511_2
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2064..2375)
DNA (312bp) protein (104aa)
Predicted nucleotidyltransferases n=3 Tax=Clostridiales RepID=D4MW04_9FIRM
Nucleotidyltransferase domain protein {ECO:0000313|EMBL:EDS21229.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
Predicted nucleotidyltransferases
L2_047_362G1_scaffold_511_3
unknown

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comp(2446..5055)
DNA (2610bp) protein (870aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0P2M9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL39569.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_047_362G1_scaffold_511_4
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5087..6778)
DNA (1692bp) protein (564aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5ZS59_9FIRM
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
Uncharacterized protein {ECO:0000313|EMBL:CDA31832.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_047_362G1_scaffold_511_5
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6790..8142)
DNA (1353bp) protein (451aa)
Diguanylate cyclase (GGDEF) domain n=2 Tax=Clostridiales RepID=D4MW01_9FIRM
diguanylate cyclase (GGDEF) domain
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EDS21225.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
L2_047_362G1_scaffold_511_6
unknown

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comp(8292..8495)
DNA (204bp) protein (68aa)

This feature has no annotations

L2_047_362G1_scaffold_511_7
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8503..9189)
DNA (687bp) protein (229aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Divergent AAA domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q4S4_9FIRM
Divergent AAA domain protein {ECO:0000313|EMBL:EKY22999.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L2_047_362G1_scaffold_511_8
unknown

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comp(9229..9903)
DNA (675bp) protein (225aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen {ECO:0000313|EMBL:CBL39565.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBL39565.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=3 Tax=Clostridiales RepID=D4MVZ9_9FIRM
L2_047_362G1_scaffold_511_9
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10232..10888)
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VMZ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV15789.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L2_047_362G1_scaffold_511_10
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11095..12525)
DNA (1431bp) protein (477aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VMZ2_9FIRM
L2_047_362G1_scaffold_511_11
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12542..13969)
DNA (1428bp) protein (476aa)
amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; Glutamine phosphoribosylpyrophosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Amidophosphoribosyltransferase n=3 Tax=Clostridiales RepID=D4MVX9_9FIRM
L2_047_362G1_scaffold_511_12
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14070..15335)
DNA (1266bp) protein (422aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
beta-glucosidase (EC:3.2.1.52)
Glycosyl hydrolase family 3 protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q5K1_9FIRM
L2_047_362G1_scaffold_511_13
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15405..16511)
DNA (1107bp) protein (369aa)
Transposase, IS605 OrfB family n=1 Tax=Clostridium sp. SS2/1 RepID=B0NZL7_9CLOT
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EKY24188.1}; Flags: Fragment;; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
transposase, IS605 OrfB family, central region
L2_047_362G1_scaffold_511_14
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16569..16766)
DNA (198bp) protein (66aa)
Uncharacterized protein (Fragment) n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q935_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY24479.1}; Flags: Fragment;; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
transposase, IS605 OrfB family, central region
L2_047_362G1_scaffold_511_15
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16857..17345
DNA (489bp) protein (163aa)
Transposase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VN23_9FIRM
Transposase {ECO:0000313|EMBL:EFV15742.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L2_047_362G1_scaffold_511_16
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17515..19650)
DNA (2136bp) protein (712aa)
His Kinase A domain-containing protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VN25_9FIRM
His Kinase A domain-containing protein {ECO:0000313|EMBL:EFV15744.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
integral membrane sensor signal transduction histidine kinase
L2_047_362G1_scaffold_511_17
unknown

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comp(19622..20329)
DNA (708bp) protein (236aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=4 Tax=Clostridiales RepID=D4MVX8_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBL39544.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_047_362G1_scaffold_511_18
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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20641..22395
DNA (1755bp) protein (585aa)
Fibronectin type III domain protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q5U6_9FIRM
Fibronectin type III domain protein {ECO:0000313|EMBL:EKY22992.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
Fibronectin type III domain.
L2_047_362G1_scaffold_511_19
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22744..23592)
DNA (849bp) protein (283aa)
Cof-like hydrolase n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q523_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EKY22991.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
HAD-superfamily hydrolase, subfamily IIB
L2_047_362G1_scaffold_511_20
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23653..27696)
DNA (4044bp) protein (1348aa)
fruA; fructan beta-fructosidase FruA (EC:3.2.1.80)
Repeat protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q5J6_9FIRM
Repeat protein {ECO:0000313|EMBL:EKY22990.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
L2_047_362G1_scaffold_511_21
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27738..28022)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Anaerostipes hadrus DSM 3319 RepID=L1Q4R4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKY22989.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
hypothetical protein
L2_047_362G1_scaffold_511_22
Anaerostipes hadrus, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28038..28874)
DNA (837bp) protein (279aa)
PTS system mannose/fructose/sorbose family IID component n=4 Tax=Clostridiales RepID=B0P055_9CLOT
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:EKY22988.1}; TaxID=649757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes hadrus DSM 3319.;"
PTS system IID component, Man family (TC 4.A.6)
L2_047_362G1_scaffold_511_23
unknown

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comp(28876..29730)
DNA (855bp) protein (285aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC n=5 Tax=Clostridiales RepID=D4MVX0_9FIRM
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC {ECO:0000313|EMBL:CBL39536.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_047_362G1_scaffold_511_24
unknown

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comp(29757..30254)
DNA (498bp) protein (166aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB {ECO:0000313|EMBL:CBL39535.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CBL39535.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB n=2 Tax=Clostridiales RepID=D4MVW9_9FIRM
L2_047_362G1_scaffold_511_25
Lachnospiraceae bacterium CAG:25, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30275..30709)
DNA (435bp) protein (145aa)
Phosphotransferase system, mannose/fructose-specific component IIA (EC:2.7.1.69)
Phosphotransferase system, mannose/fructose-specific component IIA n=5 Tax=Clostridiales RepID=D4MVW8_9FIRM
PTS system fructose IIA component {ECO:0000313|EMBL:CDA32309.1}; TaxID=1262984 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:25.;"
L2_047_362G1_scaffold_511_26
unknown

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comp(30872..32191)
DNA (1320bp) protein (440aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4MVW7_9FIRM
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBL39533.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
L2_047_362G1_scaffold_511_27
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32192..32848)
DNA (657bp) protein (219aa)
Response regulator receiver domain-containing protein n=2 Tax=Lachnospiraceae RepID=E5VML5_9FIRM
Response regulator receiver domain-containing protein {ECO:0000313|EMBL:EFV15865.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L2_047_362G1_scaffold_511_28
unknown

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comp(32857..34179)
DNA (1323bp) protein (441aa)
Signal transduction histidine kinase (EC:2.7.13.3)
Signal transduction histidine kinase {ECO:0000313|EMBL:CBL39531.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CBL39531.1};; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2.;"
Signal transduction histidine kinase n=1 Tax=butyrate-producing bacterium SSC/2 RepID=D4MVW5_9FIRM
L2_047_362G1_scaffold_511_29
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34192..35172)
DNA (981bp) protein (327aa)
Ribose transport system substrate-binding protein n=2 Tax=Lachnospiraceae RepID=E5VML7_9FIRM
Ribose transport system substrate-binding protein {ECO:0000313|EMBL:EFV15867.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L2_047_362G1_scaffold_511_30
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35273..37174)
DNA (1902bp) protein (634aa)
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthetase n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VML8_9FIRM
NAD+ synthetase {ECO:0000313|EMBL:EFV15868.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
Displaying items 1-30 of 47 in total

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