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L2_047_362G1_scaffold_513

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_513_1
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..3142
DNA (3141bp) protein (1047aa)
SMC proteins Flexible Hinge Domain n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KAF0_9FIRM
SMC proteins Flexible Hinge Domain.
Tax=BJP_08E140C01_Clostridiales_46_19
L2_047_362G1_scaffold_513_2
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3117..4355
DNA (1239bp) protein (413aa)
Uncharacterized protein conserved in bacteria C-term(DUF2220) n=1 Tax=Eubacterium sp. CAG:274 RepID=R6QH34_9FIRM
Uncharacterized protein conserved in bacteria C-term(DUF2220) {ECO:0000313|EMBL:CDC21252.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
Uncharacterized protein conserved in bacteria C-term(DUF2220).
L2_047_362G1_scaffold_513_3
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4734..6104)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8E9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67032.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
multidrug resistance protein, MatE family, drug/sodium antiporter
L2_047_362G1_scaffold_513_4
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6094..7848)
DNA (1755bp) protein (585aa)
Adenine deaminase {ECO:0000256|SAAS:SAAS00006067}; EC=3.5.4.2 {ECO:0000256|SAAS:SAAS00006067, ECO:0000313|EMBL:CCO05577.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ade; K01486 adenine deaminase (EC:3.5.4.2)
Adenine deaminase 3 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0U2_9FIRM
L2_047_362G1_scaffold_513_5
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7877..8974)
DNA (1098bp) protein (366aa)
speB2; Agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBI4_9FIRM
Agmatinase {ECO:0000313|EMBL:CDC67034.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_047_362G1_scaffold_513_6
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8977..9876)
DNA (900bp) protein (300aa)
Transcriptional regulator MerR family n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4D6_9FIRM
Transcriptional regulator, MerR family
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CCO05579.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_047_362G1_scaffold_513_7
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9909..11579)
DNA (1671bp) protein (557aa)
Ammonium transporter n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGR5_9FIRM
amt1; Ammonium transporter
Ammonium transporter {ECO:0000313|EMBL:CCO05580.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_047_362G1_scaffold_513_8
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11608..13242)
DNA (1635bp) protein (545aa)
oppA; Oligopeptide-binding protein OppA (EC:3.6.3.23)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8F4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67037.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_047_362G1_scaffold_513_9
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13271..14290)
DNA (1020bp) protein (340aa)
oppF; Oligopeptide ABC transporter, ATPase component (EC:3.6.3.23)
Oligopeptide ABC transporter, ATPase component {ECO:0000313|EMBL:CCO05582.1}; EC=3.6.3.23 {ECO:0000313|EMBL:CCO05582.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0U7_9FIRM
L2_047_362G1_scaffold_513_10
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14287..15282)
DNA (996bp) protein (332aa)
oppD; Oligopeptide ABC transporter, ATPase component (EC:3.6.3.23)
Oligopeptide ABC transporter, ATPase component {ECO:0000313|EMBL:CCO05583.1}; EC=3.6.3.23 {ECO:0000313|EMBL:CCO05583.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBI7_9FIRM
L2_047_362G1_scaffold_513_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15286..16197)
DNA (912bp) protein (304aa)
oppC; Oligopeptide ABC transporter membrane component (EC:3.6.3.23)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67040.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_047_362G1_scaffold_513_12
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16211..17155)
DNA (945bp) protein (315aa)
oppB; Oligopeptide ABC transporter membrane component (EC:3.6.3.23)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGR6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67041.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_047_362G1_scaffold_513_13
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17494..18099)
DNA (606bp) protein (202aa)
Cytidylate kinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8F7_9FIRM
Cytidylate kinase {ECO:0000313|EMBL:CDC67042.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_047_362G1_scaffold_513_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18103..18813)
DNA (711bp) protein (237aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0U9_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO05587.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_047_362G1_scaffold_513_15
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18810..20084)
DNA (1275bp) protein (425aa)
Sigma-54 interaction domain protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBJ2_9FIRM
Transcriptional regulator
Sigma-54 interaction domain protein {ECO:0000313|EMBL:CDC67044.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_047_362G1_scaffold_513_16
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20116..20895)
DNA (780bp) protein (260aa)
Probable amino acid ABC transporter, ATPase component (EC:3.6.3.21)
Probable amino acid ABC transporter, ATPase component {ECO:0000313|EMBL:CCO05589.1}; EC=3.6.3.21 {ECO:0000313|EMBL:CCO05589.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ABC-type polar amino acid transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4E5_9FIRM
L2_047_362G1_scaffold_513_17
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20918..21577)
DNA (660bp) protein (220aa)
Probable amino acid ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGS2_9FIRM
Probable amino acid ABC transporter, membrane component
Probable amino acid ABC transporter permease protein {ECO:0000313|EMBL:CDC67046.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_047_362G1_scaffold_513_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21592..22254)
DNA (663bp) protein (221aa)
Putative transporter subunit n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U8G1_9FIRM
Probable amino acid ABC transporter, membrane component
Probable amino acid ABC transporter, membrane component {ECO:0000313|EMBL:CCO05591.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_047_362G1_scaffold_513_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22312..23202)
DNA (891bp) protein (297aa)
Arginine ABC transporter periplasmic arginine-binding protein ArtP family protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0V3_9FIRM
Arginine ABC transporter periplasmic arginine-binding protein ArtP family protein {ECO:0000313|EMBL:CDC67048.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Probable amino acid ABC transporter, extracellular solute-binding protein
L2_047_362G1_scaffold_513_20
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23335..24240)
DNA (906bp) protein (302aa)
speB3; K01480 agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBJ7_9FIRM
Agmatinase {ECO:0000313|EMBL:CDC67049.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_047_362G1_scaffold_513_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24797..25207
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T4E9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67050.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_047_362G1_scaffold_513_22
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25204..25521
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TGS5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC67051.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_047_362G1_scaffold_513_23
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25555..26235
DNA (681bp) protein (227aa)
Urease {ECO:0000256|SAAS:SAAS00108089}; EC=3.5.1.5 {ECO:0000256|SAAS:SAAS00108089};; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ureA; Urease alpha subunit (helicobacter-like nomenclature) (EC:3.5.1.5)
Urease, gamma subunit n=2 Tax=Ruminococcus RepID=E9SFE6_RUMAL
L2_047_362G1_scaffold_513_24
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26239..27951
DNA (1713bp) protein (571aa)
Urease subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; EC=3.5.1.5 {ECO:0000256|HAMAP-Rule:MF_01953, ECO:0000256|SAAS:SAAS00033844};; Urea amidohydrolase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01953}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ureC; urease beta subunit (helicobacter-like nomenclature) (EC:3.5.1.5)
Urease subunit alpha n=2 Tax=Ruminococcus RepID=E9SFE7_RUMAL
L2_047_362G1_scaffold_513_25
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27967..28455
DNA (489bp) protein (163aa)
Urease accessory protein UreE n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBK2_9FIRM
Urease accessory protein UreE {ECO:0000256|HAMAP-Rule:MF_00822, ECO:0000256|SAAS:SAAS00072411}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
ureE; Urease accessory protein UreE
L2_047_362G1_scaffold_513_26
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28472..29146
DNA (675bp) protein (225aa)
ureF; Urease accessory protein UreF (EC:3.5.1.5)
Urease accessory protein UreF n=1 Tax=Ruminococcus albus 8 RepID=E9SFE9_RUMAL
Urease accessory protein UreF {ECO:0000256|HAMAP-Rule:MF_01385}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
L2_047_362G1_scaffold_513_27
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29183..29794
DNA (612bp) protein (204aa)
Urease accessory protein UreG n=2 Tax=Ruminococcus RepID=E9SFF0_RUMAL
ureG; Urease accessory protein UreG
Urease accessory protein UreG {ECO:0000256|HAMAP-Rule:MF_01389}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_047_362G1_scaffold_513_28
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29791..30558
DNA (768bp) protein (256aa)
ureD; Urease accessory protein UreD (EC:3.5.1.5)
Urease accessory protein UreD n=1 Tax=Ruminococcus albus 8 RepID=E9SFF1_RUMAL
Urease accessory protein UreD {ECO:0000256|HAMAP-Rule:MF_01384}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
L2_047_362G1_scaffold_513_29
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30643..31110)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UEI2_RUMA7
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO05602.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_047_362G1_scaffold_513_30
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31301..33580
DNA (2280bp) protein (760aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T0V9_9FIRM
Glycoside Hydrolase Family 95 protein
Glycoside Hydrolase Family 95 protein {ECO:0000313|EMBL:CCO05603.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
Displaying items 1-30 of 34 in total

View Taxonomy