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L2_047_362G1_scaffold_516

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_516_1
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..429)
DNA (429bp) protein (143aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
L-alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Dorea sp. CAG:317 RepID=R6XNI6_9FIRM
L2_047_362G1_scaffold_516_2
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

744..1601
DNA (858bp) protein (286aa)
Transcriptional regulator, RpiR family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C428_9CLOT
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:EEG72821.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
RpiR family transcriptional regulator
L2_047_362G1_scaffold_516_3
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1707..2978)
DNA (1272bp) protein (424aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Dorea sp. CAG:317 RepID=R6WEL4_9FIRM
L2_047_362G1_scaffold_516_4
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2995..3621)
DNA (627bp) protein (209aa)
Phosphoribosylglycinamide formyltransferase {ECO:0000256|HAMAP-Rule:MF_01930}; EC=2.1.2.2 {ECO:0000256|HAMAP-Rule:MF_01930};; 5'-phosphoribosylglycinamide transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; GAR transformylase {ECO:0000256|HAMAP-Rule:MF_01930}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase (EC:2.1.2.2)
Phosphoribosylglycinamide formyltransferase n=1 Tax=Dorea sp. 5-2 RepID=R9N8U7_9FIRM
L2_047_362G1_scaffold_516_5
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3615..4640)
DNA (1026bp) protein (342aa)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synthase {ECO:0000256|HAMAP-Rule:MF_00741}; AIRS {ECO:0000256|HAMAP-Rule:MF_00741}; Phosphoribosyl-aminoimidazole synthetase {ECO:0000256|HAMAP-Rule:MF_00741}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Dorea sp. CAG:105 RepID=R5DBQ0_9FIRM
L2_047_362G1_scaffold_516_6
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4689..5177)
DNA (489bp) protein (163aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
5-(carboxyamino)imidazole ribonucleotide mutase (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Dorea sp. CAG:317 RepID=R6XNH8_9FIRM
L2_047_362G1_scaffold_516_7
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5302..7350)
DNA (2049bp) protein (683aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FWG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18833.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
Leucyl aminopeptidase (aminopeptidase T)
L2_047_362G1_scaffold_516_8
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7351..7746)
DNA (396bp) protein (132aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NKM1_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39261.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_047_362G1_scaffold_516_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7709..8194)
DNA (486bp) protein (162aa)
VanZ-like protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NKM0_CLOSV
VanZ-like protein {ECO:0000313|EMBL:EDS04924.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Glycopeptide antibiotics resistance protein
L2_047_362G1_scaffold_516_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8227..8379)
DNA (153bp) protein (51aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0NKL9_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39263.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
hypothetical protein
L2_047_362G1_scaffold_516_11
Dorea longicatena, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8397..9077)
DNA (681bp) protein (227aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=411462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea longicatena DSM 13814.;"
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Dorea longicatena DSM 13814 RepID=A6BKP0_9FIRM
L2_047_362G1_scaffold_516_12
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9346..10911)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6WA00_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07903.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
xanthine/uracil/vitamin C permease
L2_047_362G1_scaffold_516_13
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10958..12691)
DNA (1734bp) protein (578aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ade2; Adenine deaminase 2 (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Dorea sp. CAG:317 RepID=R6XNM9_9FIRM
L2_047_362G1_scaffold_516_14
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12705..14489)
DNA (1785bp) protein (595aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
ade1; adenine deaminase Ade (EC:3.5.4.2)
Adenine deaminase n=1 Tax=Dorea sp. CAG:317 RepID=R6WV32_9FIRM
L2_047_362G1_scaffold_516_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14789..15691)
DNA (903bp) protein (301aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Dihydroorotate dehydrogenase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FJC7_9CLOT
dihydroorotate dehydrogenase 1B
L2_047_362G1_scaffold_516_16
Firmicutes bacterium CAG:212, Firmicutes, Bacteria

Not on your lists

comp(15691..16476)
DNA (786bp) protein (262aa)
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit n=1 Tax=Firmicutes bacterium CAG:212 RepID=R5XHV0_9FIRM
Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; Dihydroorotate oxidase B, electron transfer subunit {ECO:0000256|HAMAP-Rule:MF_01211}; TaxID=1263009 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:212.;"
2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
L2_047_362G1_scaffold_516_17
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16498..17424)
DNA (927bp) protein (309aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
orotidine 5'-phosphate decarboxylase, subfamily 2 (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=2 Tax=Coprococcus RepID=C0BDL7_9FIRM
L2_047_362G1_scaffold_516_18
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17438..18715)
DNA (1278bp) protein (426aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
Dihydroorotase n=1 Tax=Dorea sp. CAG:317 RepID=R6W9U4_9FIRM
dihydroorotase
L2_047_362G1_scaffold_516_19
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18827..20005)
DNA (1179bp) protein (393aa)
C-terminal peptidase (prc) (EC:3.4.21.102)
Putative phage prohead protease HK97 family n=1 Tax=Dorea longicatena CAG:42 RepID=R7FUA2_9FIRM
Putative phage prohead protease HK97 family {ECO:0000313|EMBL:CDE18869.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
L2_047_362G1_scaffold_516_20
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20037..21146)
DNA (1110bp) protein (370aa)
Peptidase, M23 family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C460_9CLOT
Peptidase, M23 family {ECO:0000313|EMBL:EEG72853.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Membrane-bound metallopeptidase
L2_047_362G1_scaffold_516_21
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21199..22107)
DNA (909bp) protein (303aa)
Cell division protein FtsX n=2 Tax=Clostridiales RepID=B0NKL0_CLOSV
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
cell division protein FtsX
L2_047_362G1_scaffold_516_22
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22097..22783)
DNA (687bp) protein (229aa)
Cell division ATP-binding protein FtsE n=2 Tax=Clostridiales RepID=B0NKK9_CLOSV
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EDS04913.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
cell division ATP-binding protein FtsE
L2_047_362G1_scaffold_516_23
Dorea longicatena CAG:42, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22800..23888)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Dorea longicatena CAG:42 RepID=R7FWL0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18873.1}; TaxID=1263074 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea longicatena CAG:42.;"
transcriptional regulator, CdaR family
L2_047_362G1_scaffold_516_24
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24102..24770)
DNA (669bp) protein (223aa)
Glycosyltransferase, WecB/TagA/CpsF family n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NKK6_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EGN39274.1}; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Teichoic acid biosynthesis proteins
L2_047_362G1_scaffold_516_25
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(24882..25082)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6R4M6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42900.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Small, acid-soluble spore proteins, alpha/beta type.
L2_047_362G1_scaffold_516_26
Lachnospiraceae bacterium 3-2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25155..26072)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-2 RepID=R9M9V9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67809.1}; TaxID=1235799 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-2.;"
hypothetical protein
L2_047_362G1_scaffold_516_27
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26074..26754)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NKK2_CLOSV
Uncharacterized protein {ECO:0000313|EMBL:EDS04906.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
Predicted membrane protein
L2_047_362G1_scaffold_516_28
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26751..27074)
DNA (324bp) protein (108aa)
PadR family transcriptional regulator, regulatory protein PadR n=1 Tax=Clostridium sp. ASF502 RepID=N2AJQ8_9CLOT
PadR family transcriptional regulator, regulatory protein PadR {ECO:0000313|EMBL:EMZ28306.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
transcriptional regulator, PadR family
L2_047_362G1_scaffold_516_29
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27264..30905)
DNA (3642bp) protein (1214aa)
ATP-dependent helicase/nuclease subunit A {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00044589}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00274943};; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01451, ECO:0000256|SAAS:SAAS00145970};; ATP-dependent helicase/nuclease AddA {ECO:0000256|HAMAP-Rule:MF_01451}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ATP-dependent helicase/nuclease subunit A n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NKJ9_CLOSV
recombination helicase AddA, Firmicutes type
L2_047_362G1_scaffold_516_30
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30909..34313)
DNA (3405bp) protein (1135aa)
ATP-dependent nuclease subunit B n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NKJ8_CLOSV
ATP-dependent nuclease subunit B {ECO:0000313|EMBL:EDS04902.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ATP-dependent nuclease subunit B
Displaying items 1-30 of 33 in total

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