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L2_047_362G1_scaffold_525

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_525_1
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(92..742)
DNA (651bp) protein (217aa)
LytTr DNA-binding domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q8M6_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:ERK52731.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Response regulator of the LytR/AlgR family
L2_047_362G1_scaffold_525_2
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(770..1147)
DNA (378bp) protein (126aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RPT8_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERK52732.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
helix-turn-helix domain-containing protein
L2_047_362G1_scaffold_525_3
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1487..3130)
DNA (1644bp) protein (548aa)
AMP-binding enzyme n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q9F3_9FIRM
AMP-binding enzyme {ECO:0000313|EMBL:ERK52734.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
AMP-dependent synthetase and ligase
L2_047_362G1_scaffold_525_4
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4191..5399)
DNA (1209bp) protein (403aa)
Transporter, major facilitator family protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PQD1_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK52735.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Major Facilitator Superfamily.
L2_047_362G1_scaffold_525_5
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5392..6246)
DNA (855bp) protein (285aa)
Transcriptional regulator, AraC family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q8N1_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERK52736.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
transcriptional regulator, AraC family
L2_047_362G1_scaffold_525_6
unknown

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6314..6541
DNA (228bp) protein (76aa)

This feature has no annotations

L2_047_362G1_scaffold_525_7
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6438..7619)
DNA (1182bp) protein (394aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
methionine adenosyltransferase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RPU3_9FIRM
L2_047_362G1_scaffold_525_8
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7632..8363)
DNA (732bp) protein (244aa)
aroF1; phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RGP8_9FIRM
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:ERK52738.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L2_047_362G1_scaffold_525_9
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8353..9006)
DNA (654bp) protein (218aa)
Chloramphenicol O-acetyltransferase n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q9F7_9FIRM
Chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:ERK52739.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
chloramphenicol acetyltransferase
L2_047_362G1_scaffold_525_10
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9030..10502)
DNA (1473bp) protein (491aa)
B12 binding domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PQD4_9FIRM
B12 binding domain protein {ECO:0000313|EMBL:ERK52740.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
radical SAM protein
L2_047_362G1_scaffold_525_11
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10570..11814)
DNA (1245bp) protein (415aa)
Radical SAM methylthiotransferase, MiaB/RimO family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q8N6_9FIRM
Radical SAM methylthiotransferase, MiaB/RimO family {ECO:0000313|EMBL:ERK52741.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
radical SAM protein
L2_047_362G1_scaffold_525_12
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11895..12569)
DNA (675bp) protein (225aa)
Methyltransferase domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RPV0_9FIRM
Methyltransferase domain protein {ECO:0000313|EMBL:ERK52742.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
type 11 methyltransferase
L2_047_362G1_scaffold_525_13
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12571..13392)
DNA (822bp) protein (274aa)
HAD hydrolase, family IIB n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RGQ1_9FIRM
HAD hydrolase, family IIB {ECO:0000313|EMBL:ERK52743.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
haloacid dehalogenase
L2_047_362G1_scaffold_525_14
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13373..14434)
DNA (1062bp) protein (354aa)
Aminotransferase, class I/II n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q9G1_9FIRM
Aminotransferase, class I/II {ECO:0000313|EMBL:ERK52744.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
class I and II aminotransferase
L2_047_362G1_scaffold_525_15
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14450..15532)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PQD9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK52745.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
hypothetical protein
L2_047_362G1_scaffold_525_16
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15542..16609)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q8N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK52746.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Collagenase and related protease-like protein
L2_047_362G1_scaffold_525_17
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16623..17831)
DNA (1209bp) protein (403aa)
Pyridoxal-dependent decarboxylase domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RPV5_9FIRM
Pyridoxal-dependent decarboxylase domain protein {ECO:0000313|EMBL:ERK52747.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
pyridoxal-dependent decarboxylase
L2_047_362G1_scaffold_525_18
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18343..18510)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RGQ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK52748.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L2_047_362G1_scaffold_525_19
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19153..19998)
DNA (846bp) protein (282aa)
Transcriptional regulator, AraC family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q9G4_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERK52749.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
two-component response regulator
L2_047_362G1_scaffold_525_20
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20113..21501)
DNA (1389bp) protein (463aa)
Transporter, major facilitator family protein n=3 Tax=Clostridiales RepID=U2PQE4_9FIRM
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERK52750.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
sugar (Glycoside-Pentoside-Hexuronide) transporter
L2_047_362G1_scaffold_525_21
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21508..24573)
DNA (3066bp) protein (1022aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
Beta galactosidase small chain n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q8P2_9FIRM
Beta-galactosidase/beta-glucuronidase
L2_047_362G1_scaffold_525_22
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24784..25629)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q8P8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK52756.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
membrane associated protein
L2_047_362G1_scaffold_525_23
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25791..26654
DNA (864bp) protein (288aa)
Transcriptional regulator, AraC family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RPW5_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ERK52757.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
AraC-type DNA-binding domain-containing proteins
L2_047_362G1_scaffold_525_24
unknown

Not on your lists

comp(26732..26878)
DNA (147bp) protein (49aa)

This feature has no annotations

L2_047_362G1_scaffold_525_25
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27081..27782
DNA (702bp) protein (234aa)
Response regulator receiver domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RGR6_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:ERK52758.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
transcriptional regulator
L2_047_362G1_scaffold_525_26
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27788..28717
DNA (930bp) protein (310aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q9H3_9FIRM
two-component sensor histidine kinase
L2_047_362G1_scaffold_525_27
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28731..30329)
DNA (1599bp) protein (533aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2PQF5_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ERK52760.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
MdlB6; ABC-type multidrug/protein/lipid transport system, ATPase component
L2_047_362G1_scaffold_525_28
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30333..30518)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2Q8Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK52761.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L2_047_362G1_scaffold_525_29
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30614..30895)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RPX0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK52762.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
L2_047_362G1_scaffold_525_30
Eubacterium ramulus, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30909..33092)
DNA (2184bp) protein (728aa)
Uncharacterized protein n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RGS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK52763.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;"
radical SAM superfamily protein
Displaying items 1-30 of 43 in total

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