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L2_047_362G1_scaffold_548

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_548_1
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(410..604)
DNA (195bp) protein (65aa)
Uncharacterized protein n=5 Tax=root RepID=B0G679_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23058.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_047_362G1_scaffold_548_2
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

791..1108
DNA (318bp) protein (106aa)
DNA-binding helix-turn-helix protein n=3 Tax=Lachnospiraceae RepID=B0G678_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG88229.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Helix-turn-helix.
L2_047_362G1_scaffold_548_3
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1490..1684
DNA (195bp) protein (65aa)
Uncharacterized protein n=5 Tax=root RepID=B0G677_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23056.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
Protein of unknown function (DUF3173).
L2_047_362G1_scaffold_548_4
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1719..2900
DNA (1182bp) protein (394aa)
Site-specific recombinase, phage integrase family n=4 Tax=root RepID=B0G676_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EDR46637.1}; TaxID=411461 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans ATCC 27755.;"
integrase
L2_047_362G1_scaffold_548_5
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2978..4525)
DNA (1548bp) protein (516aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008788}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
GMP synthase [glutamine-hydrolyzing] n=2 Tax=Coprococcus RepID=C0BEG8_9FIRM
GMP synthase
L2_047_362G1_scaffold_548_6
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4720..6084)
DNA (1365bp) protein (455aa)
MATE efflux family protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BEG9_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEG88246.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
MATE efflux family protein
L2_047_362G1_scaffold_548_7
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6185..6439)
DNA (255bp) protein (85aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Dorea sp. 5-2 RepID=R9N640_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:EOS78750.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
Stage III sporulation protein D.
L2_047_362G1_scaffold_548_8
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6502..6687)
DNA (186bp) protein (62aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0BEJ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86295.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_047_362G1_scaffold_548_9
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6923..8293
DNA (1371bp) protein (457aa)
MATE efflux family protein n=2 Tax=Coprococcus RepID=C0BEK0_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDB86296.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
putative efflux protein, MATE family
L2_047_362G1_scaffold_548_10
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8934..10022
DNA (1089bp) protein (363aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0BEK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86297.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L2_047_362G1_scaffold_548_11
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10039..10938)
DNA (900bp) protein (300aa)
LysR substrate binding domain protein n=2 Tax=Coprococcus RepID=C0BEK3_9FIRM
LysR substrate binding domain protein {ECO:0000313|EMBL:CDB86298.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Transcriptional regulator
L2_047_362G1_scaffold_548_12
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10986..11243)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LRP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86299.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
PTS HPr component phosphorylation site.
L2_047_362G1_scaffold_548_13
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11396..12784)
DNA (1389bp) protein (463aa)
Citrate synthase (EC:2.3.3.5 2.3.3.1)
Citrate synthase n=2 Tax=Coprococcus RepID=C0BEK5_9FIRM
Citrate synthase {ECO:0000313|EMBL:CDB86300.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_047_362G1_scaffold_548_14
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12895..13578)
DNA (684bp) protein (228aa)
TIGR00266 family protein n=2 Tax=Coprococcus RepID=C0BEK6_9FIRM
TIGR00266 family protein {ECO:0000313|EMBL:EEG88283.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
conserved hypothetical protein TIGR00266
L2_047_362G1_scaffold_548_15
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(13568..14452)
DNA (885bp) protein (295aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
dimethyladenosine transferase (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase A n=2 Tax=Coprococcus RepID=C0BEK7_9FIRM
L2_047_362G1_scaffold_548_16
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14486..15247)
DNA (762bp) protein (254aa)
hydrolase, TatD family (EC:3.1.21.-)
Hydrolase, TatD family n=2 Tax=Coprococcus RepID=C0BEK8_9FIRM
Hydrolase, TatD family {ECO:0000313|EMBL:EEG88285.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L2_047_362G1_scaffold_548_17
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15454..15744
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=R6LRQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86304.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L2_047_362G1_scaffold_548_18
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16189..16695
DNA (507bp) protein (169aa)
Protein ThiW n=2 Tax=Coprococcus RepID=C0BEL0_9FIRM
Protein ThiW {ECO:0000313|EMBL:CDB86305.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
thiW protein
L2_047_362G1_scaffold_548_19
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17045..18355
DNA (1311bp) protein (437aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiamine biosynthesis protein ThiC {ECO:0000256|HAMAP-Rule:MF_00089}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Phosphomethylpyrimidine synthase n=2 Tax=Coprococcus RepID=C0BEL2_9FIRM
hydroxymethylpyrimidine synthase
L2_047_362G1_scaffold_548_20
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18528..18764
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0BEL3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86307.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_047_362G1_scaffold_548_21
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18829..20733)
DNA (1905bp) protein (635aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01228}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=2 Tax=Coprococcus RepID=C0BEL4_9FIRM
L2_047_362G1_scaffold_548_22
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21169..21684)
DNA (516bp) protein (172aa)
HTH domain protein n=2 Tax=Coprococcus RepID=C0BEL5_9FIRM
HTH domain protein {ECO:0000313|EMBL:EEG88292.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Predicted small molecule binding protein (contains 3H domain)
L2_047_362G1_scaffold_548_23
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21795..22646)
DNA (852bp) protein (284aa)
Nicotinate-nucleotide diphosphorylase (Carboxylating) {ECO:0000313|EMBL:EEG88293.1}; EC=2.4.2.19 {ECO:0000313|EMBL:EEG88293.1};; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
nicotinate-nucleotide pyrophosphorylase (EC:2.4.2.19)
Nicotinate-nucleotide diphosphorylase (Carboxylating) n=2 Tax=Coprococcus RepID=C0BEL6_9FIRM
L2_047_362G1_scaffold_548_24
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22682..23884)
DNA (1203bp) protein (401aa)
Aspartate oxidase (EC:1.4.3.16)
FAD binding domain protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LVW6_9FIRM
FAD binding domain protein {ECO:0000313|EMBL:CDB86311.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
L2_047_362G1_scaffold_548_25
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23955..24863)
DNA (909bp) protein (303aa)
Quinolinate synthase {ECO:0000256|SAAS:SAAS00096027}; EC=2.5.1.72 {ECO:0000256|SAAS:SAAS00096027};; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Quinolinate synthetase complex A subunit n=1 Tax=Coprococcus comes CAG:19 RepID=R6MKD0_9FIRM
quinolinate synthetase A
L2_047_362G1_scaffold_548_26
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25049..26812
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LFL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86313.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L2_047_362G1_scaffold_548_27
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26908..27960)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=2 Tax=Coprococcus RepID=C0BEM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86314.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Predicted membrane protein, putative toxin regulator
L2_047_362G1_scaffold_548_28
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28173..30416)
DNA (2244bp) protein (748aa)
Uncharacterized protein n=1 Tax=Coprococcus comes CAG:19 RepID=R6LK91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB86315.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
hypothetical protein
L2_047_362G1_scaffold_548_29
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30603..31127)
DNA (525bp) protein (175aa)
Transporter gate domain protein n=2 Tax=Coprococcus RepID=C0BEM4_9FIRM
Transporter gate domain protein {ECO:0000313|EMBL:CDB86316.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
Uncharacterized membrane protein
L2_047_362G1_scaffold_548_30
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31215..32579)
DNA (1365bp) protein (455aa)
MATE efflux family protein n=2 Tax=Coprococcus RepID=C0BEM5_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDB86317.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
putative efflux protein, MATE family
Displaying items 1-30 of 31 in total

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