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L2_047_362G1_scaffold_563

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_563_1
Ruminococcus sp. CAG:579, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1214)
DNA (1212bp) protein (404aa)
Recombinase n=1 Tax=Ruminococcus sp. CAG:579 RepID=R6CQI5_9FIRM
Recombinase {ECO:0000313|EMBL:CDA73756.1}; TaxID=1262963 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:579.;"
recombinase
L2_047_362G1_scaffold_563_2
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1303..1482)
DNA (180bp) protein (60aa)
Conserved domain protein n=1 Tax=Ruminococcus albus 8 RepID=E9S9M4_RUMAL
Conserved domain protein {ECO:0000313|EMBL:EGC04012.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein
L2_047_362G1_scaffold_563_3
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1750..2286)
DNA (537bp) protein (179aa)
Methylated-DNA/protein-cysteine methyltransferase n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UAH3_RUMA7
methylated-DNA--protein-cysteine methyltransferase
Methylated-DNA/protein-cysteine methyltransferase {ECO:0000313|EMBL:ADU22395.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L2_047_362G1_scaffold_563_4
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2261..2884)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2PQ92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK46306.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
L2_047_362G1_scaffold_563_5
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3340..4107
DNA (768bp) protein (256aa)
NAD(P)H dehydrogenase (Quinone) n=1 Tax=Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO 2250 / 7) RepID=E6UAH5_RUMA7
NAD(P)H dehydrogenase (quinone)
NAD(P)H dehydrogenase (Quinone) {ECO:0000313|EMBL:ADU22397.1}; TaxID=697329 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus (strain ATCC 27210 / DSM 20455 / JCM 14654 / NCDO; 2250 / 7).;"
L2_047_362G1_scaffold_563_6
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4134..5129)
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus 8 RepID=E9S9M8_RUMAL
Uncharacterized protein {ECO:0000313|EMBL:EGC04010.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
L2_047_362G1_scaffold_563_7
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5170..8586)
DNA (3417bp) protein (1139aa)
Uncharacterized protein n=1 Tax=Ruminococcus albus 8 RepID=E9S9M8_RUMAL
Uncharacterized protein {ECO:0000313|EMBL:EGC04010.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
L2_047_362G1_scaffold_563_8
unknown

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comp(8579..9217)
DNA (639bp) protein (213aa)

This feature has no annotations

L2_047_362G1_scaffold_563_9
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9431..9640
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37D33
Uncharacterized protein {ECO:0000313|EMBL:EGC03016.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
hypothetical protein
L2_047_362G1_scaffold_563_10
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9656..9985
DNA (330bp) protein (110aa)
Single-strand binding family protein n=1 Tax=Ruminococcus albus 8 RepID=E9SGE8_RUMAL
Single-strand binding family protein {ECO:0000313|EMBL:EGC01701.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
ssDNA-binding protein
L2_047_362G1_scaffold_563_11
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10366..11454
DNA (1089bp) protein (363aa)
Site-specific recombinase, phage integrase family n=1 Tax=Ruminococcus albus 8 RepID=E9S7J4_RUMAL
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EGC04750.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
integrase family protein
L2_047_362G1_scaffold_563_12
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11641..13590
DNA (1950bp) protein (650aa)
Eco57I restriction endonuclease n=1 Tax=Ruminococcus albus 8 RepID=E9SE33_RUMAL
Eco57I restriction endonuclease {ECO:0000313|EMBL:EGC02437.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
type II restriction endonuclease
L2_047_362G1_scaffold_563_13
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13591..16926
DNA (3336bp) protein (1112aa)
DNA or RNA helicases of superfamily II (EC:3.1.21.4)
Type III restriction enzyme, res subunit n=1 Tax=Ruminococcus albus 8 RepID=E9SE34_RUMAL
Type III restriction enzyme, res subunit {ECO:0000313|EMBL:EGC02444.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
L2_047_362G1_scaffold_563_14
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17120..17839)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV98_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04708.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_047_362G1_scaffold_563_15
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17836..18351)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBB3_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04707.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_047_362G1_scaffold_563_16
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18504..19016)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65140.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_047_362G1_scaffold_563_17
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19035..19574)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65138.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_047_362G1_scaffold_563_18
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19912..20208
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBB1_9FIRM
hypothetical protein predicted by Glimmer/Critica
Uncharacterized protein {ECO:0000313|EMBL:CCO04703.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_047_362G1_scaffold_563_19
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20217..20582
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYU8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC65135.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein
L2_047_362G1_scaffold_563_20
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20582..21187
DNA (606bp) protein (202aa)
Flavin reductase-like protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5W9_9FIRM
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCO04701.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_047_362G1_scaffold_563_21
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21192..22340
DNA (1149bp) protein (383aa)
Zinc dependent phospholipase C n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV90_9FIRM
Zinc dependent phospholipase C {ECO:0000313|EMBL:CDC65133.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L2_047_362G1_scaffold_563_22
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22383..23165)
DNA (783bp) protein (261aa)
Putative ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2T5_9FIRM
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCO04699.1}; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
L2_047_362G1_scaffold_563_23
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23159..23857)
DNA (699bp) protein (233aa)
ABC transporter ATPase component (EC:3.6.3.-)
ABC transporter ATP-binding protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBA6_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDC65131.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_047_362G1_scaffold_563_24
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23918..24178)
DNA (261bp) protein (87aa)
Stage V sporulation protein S n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYU3_9FIRM
spoVS; Stage V sporulation protein S
Stage V sporulation protein S {ECO:0000313|EMBL:CDC65130.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_047_362G1_scaffold_563_25
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24286..25053)
DNA (768bp) protein (256aa)
Putative metallophosphoesterase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5W5_9FIRM
Putative metallophosphoesterase {ECO:0000313|EMBL:CDC65129.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
conserved hypothetical protein
L2_047_362G1_scaffold_563_26
Ruminococcus bicirculans, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25172..27112)
DNA (1941bp) protein (647aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458, ECO:0000313|EMBL:CCO04695.1};; TaxID=1160721 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bicirculans.;"
ftsH; Cell division protease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SV85_9FIRM
L2_047_362G1_scaffold_563_27
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27151..27675)
DNA (525bp) protein (175aa)
hpt; hypoxanthine-guanine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6U2T1_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDC65127.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_047_362G1_scaffold_563_28
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27775..29100)
DNA (1326bp) protein (442aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
tilS; tRNA(Ile)-lysidine synthetase (EC:6.3.4.-)
tRNA(Ile)-lysidine synthase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6TBA3_9FIRM
L2_047_362G1_scaffold_563_29
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29093..30454)
DNA (1362bp) protein (454aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6SYT8_9FIRM
Replicative DNA helicase {ECO:0000313|EMBL:CDC65125.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
L2_047_362G1_scaffold_563_30
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(30457..30903)
DNA (447bp) protein (149aa)
50S ribosomal protein L9 n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T5W1_9FIRM
rplI; ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
Displaying items 1-30 of 32 in total

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