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L2_047_362G1_scaffold_626

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_626_1
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(358..906)
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6UPP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC72767.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
Helix-turn-helix.
L2_047_362G1_scaffold_626_2
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1302..1487
DNA (186bp) protein (62aa)
Prophage CP4-57 regulatory protein (AlpA) n=2 Tax=Clostridiales RepID=D4KSW3_9FIRM
Prophage CP4-57 regulatory protein (AlpA).
Prophage CP4-57 regulatory protein (AlpA) {ECO:0000313|EMBL:CBL09965.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L2_047_362G1_scaffold_626_3
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1741..2352
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WTI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72261.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
Site-specific recombinase XerD
L2_047_362G1_scaffold_626_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2349..2519
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PEL6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22778.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Relaxase/Mobilisation nuclease domain.
L2_047_362G1_scaffold_626_5
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2685..2870
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C7Y0_9FIRM
Transcriptional regulator, AlpA family {ECO:0000313|EMBL:KEF36078.1}; TaxID=1348973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans MEV2011.;"
DNA binding domain, excisionase family
L2_047_362G1_scaffold_626_6
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2897..3151
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B72073
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67809.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_047_362G1_scaffold_626_7
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3148..4371
DNA (1224bp) protein (408aa)
C-5 cytosine-specific family DNA methylase (EC:2.1.1.37)
C-5 cytosine-specific family DNA methylase {ECO:0000313|EMBL:CDM67810.1}; EC=2.1.1.37 {ECO:0000313|EMBL:CDM67810.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A0M8_9FIRM
L2_047_362G1_scaffold_626_8
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4371..5411
DNA (1041bp) protein (347aa)
C-5 cytosine-specific family DNA methylase (EC:2.1.1.37)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417, ECO:0000313|EMBL:CDM67811.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
Cytosine-specific methyltransferase n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N1ZSE7_9FIRM
L2_047_362G1_scaffold_626_9
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5404..7230
DNA (1827bp) protein (609aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Streptococcus mitis ATCC 6249 RepID=E0PRC0_STRMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67812.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L2_047_362G1_scaffold_626_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7248..9230
DNA (1983bp) protein (661aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IJM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI58244.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
LlaJI restriction endonuclease.
L2_047_362G1_scaffold_626_11
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9330..10745
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MF99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDR97204.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes caccae DSM 14662.;"
site-specific DNA-methyltransferase restriction-modification protein
L2_047_362G1_scaffold_626_12
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10758..12893
DNA (2136bp) protein (712aa)
Signal transduction histidine kinase n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LND1_9FIRM
Signal transduction histidine kinase {ECO:0000313|EMBL:CCY74576.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
hypothetical protein
L2_047_362G1_scaffold_626_13
Paenibacillus riograndensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12893..13486
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LNJ7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CQR52557.1}; TaxID=1073571 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus riograndensis SBR5.;"
L2_047_362G1_scaffold_626_14
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13491..14117
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5L5Z2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY74580.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
hypothetical protein
L2_047_362G1_scaffold_626_15
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14193..15644
DNA (1452bp) protein (484aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WTJ8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72276.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
putative transcriptional regulator
L2_047_362G1_scaffold_626_16
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15845..16645
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Ruminococcus lactaris CC59_002D RepID=V8C840_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD23195.1}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
hypothetical protein
L2_047_362G1_scaffold_626_17
Treponema sp. JC4, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16772..17323
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Treponema sp. JC4 RepID=I0X6W5_9SPIO
Uncharacterized protein {ECO:0000313|EMBL:EID84381.1}; TaxID=1124982 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema sp. JC4.;"
hypothetical protein
L2_047_362G1_scaffold_626_18
unknown

Not on your lists

17864..17953
DNA (90bp) protein (30aa)

This feature has no annotations

L2_047_362G1_scaffold_626_19
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17999..18250
DNA (252bp) protein (84aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BE12_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88089.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
Uncharacterised protein family (UPF0158).
L2_047_362G1_scaffold_626_20
unknown

Not on your lists

18247..18369
DNA (123bp) protein (41aa)

This feature has no annotations

L2_047_362G1_scaffold_626_21
Eubacterium hallii CAG:12, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18353..18637
DNA (285bp) protein (95aa)
4Fe-4S binding domain protein n=2 Tax=Eubacterium RepID=C0EVZ8_9FIRM
4Fe-4S binding domain protein {ECO:0000313|EMBL:CDB18970.1}; TaxID=1263078 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium hallii CAG:12.;"
hypothetical protein
L2_047_362G1_scaffold_626_22
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18928..20595
DNA (1668bp) protein (556aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BE10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88087.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L2_047_362G1_scaffold_626_23
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20592..21869
DNA (1278bp) protein (426aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BE09_9FIRM
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EEG88086.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
hypothetical protein
L2_047_362G1_scaffold_626_24
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

Not on your lists

21866..22489
DNA (624bp) protein (208aa)
Response regulator protein VraR n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BUV0_9FIRM
Response regulator protein VraR {ECO:0000313|EMBL:CDA62916.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L2_047_362G1_scaffold_626_25
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22640..24004
DNA (1365bp) protein (455aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BE06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88083.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
carbohydrate ABC transporter substrate-binding protein
L2_047_362G1_scaffold_626_26
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24040..25641
DNA (1602bp) protein (534aa)
Transcriptional regulator, LuxR family n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BE05_9FIRM
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEG88082.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L2_047_362G1_scaffold_626_27
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26012..26362
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BE04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88081.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L2_047_362G1_scaffold_626_28
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26403..27086
DNA (684bp) protein (228aa)
TIGR00266 family protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BE03_9FIRM
TIGR00266 family protein {ECO:0000313|EMBL:EEG88080.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
conserved hypothetical protein TIGR00266
L2_047_362G1_scaffold_626_29
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27105..27845
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BE02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88079.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
L2_047_362G1_scaffold_626_30
Coprococcus comes, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27886..29364
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Coprococcus comes ATCC 27758 RepID=C0BE01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG88078.1}; TaxID=470146 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus comes ATCC 27758.;"
SdhA; succinate dehydrogenase
Displaying items 1-30 of 32 in total

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