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L2_047_362G1_scaffold_645

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_645_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..136
DNA (135bp) protein (45aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CLH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23272.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L2_047_362G1_scaffold_645_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

163..1122
DNA (960bp) protein (320aa)
Putative 3-hydroxybutyryl-CoA dehydrogenase n=2 Tax=Clostridiales RepID=U2DCT4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO23322.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
NAD-binding 3-hydroxyacyl-CoA dehydrogenase
L2_047_362G1_scaffold_645_3
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1294..2145)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HTD8_9FIRM
3-keto-5-aminohexanoate cleavage enzyme {ECO:0000313|EMBL:EYE89803.1}; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Fervidicella.;" source="Fervidicella metallireducens AeB.;"
hypothetical protein
L2_047_362G1_scaffold_645_4
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2198..3553)
DNA (1356bp) protein (452aa)
Short chain fatty acids transporter n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RQB4_9CLOT
Short chain fatty acids transporter {ECO:0000313|EMBL:CDF57435.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Thermobrachium celere DSM 8682.;"
short chain fatty acid transporter
L2_047_362G1_scaffold_645_5
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3697..4149)
DNA (453bp) protein (151aa)
Methylmalonyl-CoA epimerase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CWX5_9CLOT
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:KIH77771.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter ferrihydriticus DSM 17813.;"
methylmalonyl-CoA epimerase
L2_047_362G1_scaffold_645_6
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4488..5414
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Clostridium tyrobutyricum RepID=UPI000313F740
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDL90622.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.;"
bsdA; HTH-type transcriptional regulator BsdA
L2_047_362G1_scaffold_645_7
Lachnospiraceae bacterium A2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5454..6797)
DNA (1344bp) protein (448aa)
Butyryl-CoA:acetate CoA-transferase n=1 Tax=Lachnospiraceae bacterium A2 RepID=R9KQN0_9FIRM
Butyryl-CoA:acetate CoA-transferase {ECO:0000313|EMBL:EOS48506.1}; TaxID=397290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A2.;"
Acetyl-CoA hydrolase
L2_047_362G1_scaffold_645_8
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6963..8144)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOC99328.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;"
4Fe-4S ferredoxin
L2_047_362G1_scaffold_645_9
Clostridium sp. SS2/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8146..9672)
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000363E313
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EDS21220.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1.;"
virulence factor mvin superfamily
L2_047_362G1_scaffold_645_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9685..10638)
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4Q1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10653.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_047_362G1_scaffold_645_11
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10746..11906)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XPE9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10661.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_047_362G1_scaffold_645_12
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11928..12977)
DNA (1050bp) protein (350aa)
Putative transporter (Fragment) n=1 Tax=Lactobacillus reuteri RepID=Q5SBM1_LACRE
Uncharacterized protein {ECO:0000313|EMBL:AKB82962.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
transporter
L2_047_362G1_scaffold_645_13
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12974..13987)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4Q1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:AKI05028.1}; TaxID=1194971 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius str. Ren.;"
hypothetical protein
L2_047_362G1_scaffold_645_14
Bacillus sp. UMTAT18, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14025..15176)
DNA (1152bp) protein (384aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI0003616A22
Group 1 glycosyl transferase {ECO:0000313|EMBL:KKC53772.1}; TaxID=1565146 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. UMTAT18.;"
group 1 glycosyl transferase
L2_047_362G1_scaffold_645_15
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15188..16072)
DNA (885bp) protein (295aa)
LPS biosynthesis glycosyltransferase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X787_9CLOT
LPS biosynthesis glycosyltransferase {ECO:0000313|EMBL:CDA10660.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
glycosyl transferase 2 family protein
L2_047_362G1_scaffold_645_16
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16161..17147)
DNA (987bp) protein (329aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDN00846.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDN00846.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NTT3_9FIRM
Glycosyltransferases involved in cell wall biogenesis
L2_047_362G1_scaffold_645_17
Lachnospiraceae bacterium TWA4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17147..17689)
DNA (543bp) protein (181aa)
Acetyltransferase (Isoleucine patch superfamily) n=2 Tax=Clostridiales RepID=D4MVY9_9FIRM
TWA4_scaffold00001, whole genome shotgun sequence {ECO:0000313|EMBL:KIR02080.1}; TaxID=1392836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium TWA4.;"
Acetyltransferase (isoleucine patch superfamily)
L2_047_362G1_scaffold_645_18
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17686..18801)
DNA (1116bp) protein (372aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDN00849.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDN00849.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NTT6_9FIRM
Glycosyltransferase
L2_047_362G1_scaffold_645_19
Bacillus sonorensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18818..19882)
DNA (1065bp) protein (355aa)
epsJ3; putative glycosyltransferase EpsJ (EC:2.4.-.-)
Glycosyltransferase EpsJ n=1 Tax=Bacillus sonorensis L12 RepID=M5PBT1_9BACI
Glycosyltransferase EpsJ {ECO:0000313|EMBL:EME73250.1}; TaxID=1274524 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sonorensis L12.;"
L2_047_362G1_scaffold_645_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19882..20865)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X4Q1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10653.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L2_047_362G1_scaffold_645_21
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20862..21779)
DNA (918bp) protein (306aa)
Beta-glycosyltransferase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y1W2_9CLOT
Beta-glycosyltransferase {ECO:0000313|EMBL:CDA10652.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
glycosyl transferase family protein
L2_047_362G1_scaffold_645_22
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21787..22764)
DNA (978bp) protein (326aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDN00851.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDN00851.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NTT8_9FIRM
Glycosyltransferases involved in cell wall biogenesis
L2_047_362G1_scaffold_645_23
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22778..23890)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPS1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN01846.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
L2_047_362G1_scaffold_645_24
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23887..24975)
DNA (1089bp) protein (363aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EDN01847.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDN01847.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPS2_9FIRM
Glycosyltransferase
L2_047_362G1_scaffold_645_25
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24972..25655)
DNA (684bp) protein (228aa)
Bacterial sugar transferase {ECO:0000313|EMBL:EDN01848.1}; EC=2.4.1.- {ECO:0000313|EMBL:EDN01848.1};; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Bacterial sugar transferase n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NPS3_9FIRM
Sugar transferases involved in lipopolysaccharide synthesis
L2_047_362G1_scaffold_645_26
unknown

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comp(25727..25867)
DNA (141bp) protein (47aa)

This feature has no annotations

L2_047_362G1_scaffold_645_27
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

Not on your lists

comp(25864..26856)
DNA (993bp) protein (331aa)
Lipoate--protein ligase {ECO:0000256|SAAS:SAAS00026637}; EC=2.7.7.63 {ECO:0000256|SAAS:SAAS00026637};; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
Lipoyltransferase and lipoate-protein ligase n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QAZ9_9FIRM
lipoate-protein ligase
L2_047_362G1_scaffold_645_28
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26938..28008)
DNA (1071bp) protein (357aa)
Uncharacterized protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NU23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDN00370.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
hypothetical protein
L2_047_362G1_scaffold_645_29
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28117..29151)
DNA (1035bp) protein (345aa)
Site-specific recombinase, phage integrase family n=2 Tax=Oscillibacter RepID=U2QNU7_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:ERK64585.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
integrase family protein
L2_047_362G1_scaffold_645_30
unknown

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comp(29237..29482)
DNA (246bp) protein (82aa)

This feature has no annotations

Displaying 30 items

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