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L2_047_362G1_scaffold_719

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_719_1
unknown

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1..237
DNA (237bp) protein (79aa)

This feature has no annotations

L2_047_362G1_scaffold_719_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(363..542)
DNA (180bp) protein (60aa)
Toxin-antitoxin system, toxin component, MazF family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3Q8_9FIRM
Toxin-antitoxin system, toxin component, MazF family {ECO:0000313|EMBL:EDP20300.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L2_047_362G1_scaffold_719_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1156..4239)
DNA (3084bp) protein (1028aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613, ECO:0000313|EMBL:CBK99166.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYR7_9FIRM
L2_047_362G1_scaffold_719_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4365..5228)
DNA (864bp) protein (288aa)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYR8_9FIRM
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK99167.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_719_5
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5221..6120)
DNA (900bp) protein (300aa)
Lactose transport system (Permease) n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TNR6_9FIRM
lactose transport system (permease)
Lactose transport system (Permease) {ECO:0000313|EMBL:CDC69501.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L2_047_362G1_scaffold_719_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6154..7488)
DNA (1335bp) protein (445aa)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYR9_9FIRM
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CBK99168.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_719_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7771..8730)
DNA (960bp) protein (320aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYS0_9FIRM
AraC-type DNA-binding domain-containing proteins
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CBK99169.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_719_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9083..10693)
DNA (1611bp) protein (537aa)
ABC-type multidrug transport system, ATPase and permease components n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYS1_9FIRM
ABC-type multidrug transport system, ATPase and permease components {ECO:0000313|EMBL:CBK99170.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
ABC-type multidrug transport system, ATPase and permease components
L2_047_362G1_scaffold_719_9
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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11222..12139
DNA (918bp) protein (306aa)
Helix-turn-helix n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RC75_9FIRM
Helix-turn-helix {ECO:0000313|EMBL:CDC42919.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
Helix-turn-helix.
L2_047_362G1_scaffold_719_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12524..12841)
DNA (318bp) protein (106aa)
Plasmid stabilisation system protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYS2_9FIRM
Plasmid stabilisation system protein.
Plasmid stabilisation system protein {ECO:0000313|EMBL:CBK99171.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_719_11
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12825..13112)
DNA (288bp) protein (96aa)
Prevent-host-death family protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYS3_9FIRM
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:CBK99172.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_719_12
unknown

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comp(13436..13558)
DNA (123bp) protein (41aa)

This feature has no annotations

L2_047_362G1_scaffold_719_13
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13710..14231)
DNA (522bp) protein (174aa)
Transcriptional regulator, PadR family n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYS5_9FIRM
transcriptional regulator, PadR family
Transcriptional regulator, PadR family {ECO:0000313|EMBL:CBK99174.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_719_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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14444..15820
DNA (1377bp) protein (459aa)
MATE efflux family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YP66_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EHM52858.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
putative efflux protein, MATE family
L2_047_362G1_scaffold_719_15
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15892..16077
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AM92_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFC97076.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
hypothetical protein
L2_047_362G1_scaffold_719_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16435..17343)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI66_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07141.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
membrane associated protein
L2_047_362G1_scaffold_719_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17472..17903)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3E0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU97620.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
hypothetical protein
L2_047_362G1_scaffold_719_18
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18034..19410)
DNA (1377bp) protein (459aa)
Sugar (Glycoside-Pentoside-Hexuronide) transporter n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYS7_9FIRM
sugar (Glycoside-Pentoside-Hexuronide) transporter
Sugar (Glycoside-Pentoside-Hexuronide) transporter {ECO:0000313|EMBL:CBK99176.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_719_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19632..20534
DNA (903bp) protein (301aa)
Transcriptional regulator, AraC family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H3E2_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEU97622.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
AraC-type DNA-binding domain-containing proteins
L2_047_362G1_scaffold_719_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20687..21073)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYS8_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99177.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_719_21
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21179..21613)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SAF9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22035.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L2_047_362G1_scaffold_719_22
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21682..22041)
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI72_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFQ07117.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Protein of unknown function (DUF2500).
L2_047_362G1_scaffold_719_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22043..22390)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZI73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EDP22879.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L2_047_362G1_scaffold_719_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22420..22647)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4Y5_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98578.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_719_25
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22637..22897)
DNA (261bp) protein (87aa)
Uncharacterized protein n=6 Tax=root RepID=A7VCW1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDO58709.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L2_047_362G1_scaffold_719_26
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23134..23691
DNA (558bp) protein (186aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HHM7_9CLOT
Trehalose transport system permease protein SugB {ECO:0000313|EMBL:KJJ70090.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
ABC transporter permease
L2_047_362G1_scaffold_719_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23773..24420)
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYT2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK99181.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_719_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24417..25277)
DNA (861bp) protein (287aa)
ABC-type multidrug transport system, ATPase component n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4JYT3_9FIRM
ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:CBK99182.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L2_047_362G1_scaffold_719_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25280..25657)
DNA (378bp) protein (126aa)
Transcriptional regulator, GntR family n=2 Tax=Clostridiales RepID=C4ZE54_EUBR3
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEU96307.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L2_047_362G1_scaffold_719_30
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26094..26246)
DNA (153bp) protein (51aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WUT8_9FIRM
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:CBL22066.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
Displaying items 1-30 of 36 in total

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