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L2_047_362G1_scaffold_861

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L2_047_362G1_scaffold_861_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..395)
DNA (393bp) protein (131aa)
50S ribosomal protein L1 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAP3_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rplA; 50S ribosomal protein L1
L2_047_362G1_scaffold_861_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(410..835)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=3 Tax=Clostridiales RepID=G9YMY3_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
rplK; ribosomal protein L11
L2_047_362G1_scaffold_861_3
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(972..1496)
DNA (525bp) protein (175aa)
Transcription termination/antitermination protein NusG n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAP6_9FIRM
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
nusG; transcription antitermination protein NusG
L2_047_362G1_scaffold_861_4
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1502..1798)
DNA (297bp) protein (99aa)
Protein translocase subunit SecE n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAP7_9FIRM
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
preprotein translocase subunit SecE
L2_047_362G1_scaffold_861_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1838..2005)
DNA (168bp) protein (56aa)
50S ribosomal protein L33 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAP8_9FIRM
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpmG; 50S ribosomal protein L33
L2_047_362G1_scaffold_861_6
unknown

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2031..2339
DNA (309bp) protein (103aa)

This feature has no annotations

L2_047_362G1_scaffold_861_7
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2416..2895
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI0003634312
Putative Xre family DNA-binding protein {ECO:0000313|EMBL:GAO37986.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
XRE family transcriptional regulator
L2_047_362G1_scaffold_861_8
unknown

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2920..3411
DNA (492bp) protein (164aa)

This feature has no annotations

L2_047_362G1_scaffold_861_9
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

3737..4093
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XRN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12329.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_047_362G1_scaffold_861_10
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

4090..4473
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2Y7E1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12328.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
hypothetical protein
L2_047_362G1_scaffold_861_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4528..5856)
DNA (1329bp) protein (443aa)
Transporter n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4X9P0_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
SNF family Na+-dependent transporter
L2_047_362G1_scaffold_861_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6038..6337)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47428.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
stress responsive alpha-beta barrel domain-containing protein
L2_047_362G1_scaffold_861_13
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6394..7206)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAQ1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47429.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_047_362G1_scaffold_861_14
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

7345..7851
DNA (507bp) protein (169aa)
HAD phosphatase, family IIIA n=1 Tax=Firmicutes bacterium ASF500 RepID=V2XT23_9FIRM
HAD phosphatase, family IIIA {ECO:0000313|EMBL:ESL12824.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
had superfamily (subfamily IIIa) phosphatase, tigr01668
L2_047_362G1_scaffold_861_15
Firmicutes bacterium ASF500, Firmicutes, Bacteria

Not on your lists

7848..8714
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2ZEI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL12825.1}; TaxID=1378168 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium ASF500.;"
xylose isomerase domain-containing protein TIM barrel
L2_047_362G1_scaffold_861_16
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9010..9432
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9LAF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS55336.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
hypothetical protein
L2_047_362G1_scaffold_861_17
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9449..10513
DNA (1065bp) protein (355aa)
proline aminopeptidase (EC:3.4.-.-)
Xaa-Pro aminopeptidase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAQ4_9FIRM
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:EGJ47432.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_362G1_scaffold_861_18
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10605..11174
DNA (570bp) protein (190aa)
Elongation factor P n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAQ5_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
efp; elongation factor P
L2_047_362G1_scaffold_861_19
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11370..11765
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XAQ6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ47434.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_047_362G1_scaffold_861_20
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11842..12750)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RLT6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49868.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
cation diffusion facilitator family transporter
L2_047_362G1_scaffold_861_21
unknown

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13038..13442
DNA (405bp) protein (135aa)

This feature has no annotations

L2_047_362G1_scaffold_861_22
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13666..15102
DNA (1437bp) protein (479aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
pyk; Pyk (EC:2.7.1.40)
Pyruvate kinase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHH4_9FIRM
L2_047_362G1_scaffold_861_23
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15259..15852
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45447.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
L2_047_362G1_scaffold_861_24
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15839..16189
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XHG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45446.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Smr domain-containing protein
L2_047_362G1_scaffold_861_25
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16428..16748)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCZ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46686.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_362G1_scaffold_861_26
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16745..17917)
DNA (1173bp) protein (391aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCY9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ46685.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L2_047_362G1_scaffold_861_27
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17961..18770)
DNA (810bp) protein (270aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCW4_9FIRM
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
putative cobalt ABC transporter permease protein
L2_047_362G1_scaffold_861_28
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18771..19631)
DNA (861bp) protein (287aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Cobalt/nickel transport system ATP-binding protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCW5_9FIRM
putative cobalt ABC transporter ATP-binding protein
L2_047_362G1_scaffold_861_29
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19823..20668)
DNA (846bp) protein (282aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01710};; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Cobalt/nickel transport system ATP-binding protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCW6_9FIRM
putative cobalt ABC transporter ATP-binding protein
L2_047_362G1_scaffold_861_30
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20769..21635)
DNA (867bp) protein (289aa)
23S rRNA (-C5)-methyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XCW7_9FIRM
23S rRNA (-C5)-methyltransferase {ECO:0000313|EMBL:EGJ46663.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
hypothetical protein
Displaying items 1-30 of 37 in total

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